BLASTX nr result

ID: Coptis21_contig00030202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030202
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou...    66   3e-09
ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002463935.1| hypothetical protein SORBIDRAFT_01g009190 [S...    62   5e-08
gb|EAY93475.1| hypothetical protein OsI_15276 [Oryza sativa Indi...    58   7e-07

>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = -1

Query: 419 PPTP-GPVPWIIFPCGKGLKSQTFTNILDPLSSYVMSFREIRGKICLLSMHGWLVMIDYL 243
           PP P GP PW+++  GKG + QTF  I DP  + +    E+  KIC  S HGW    D  
Sbjct: 15  PPAPAGPYPWLVYCHGKGREDQTFWTISDPKRTALRRIPELDSKICWASSHGWCFFSDR- 73

Query: 242 IEDQCGKEQDFLWNPDTREVINLPLIDSQDASDCCLSILSCVPTNPDCMILLVGVKEKFF 63
                 +   FLWNP T E I+LP  D Q  +      +S  P    C ILL        
Sbjct: 74  -----ARRHFFLWNPLTLEKIDLP--DLQVYNIISSGYISSSPRETGCKILLFVGDHPSI 126

Query: 62  LFCTPGDEKWTRQSYN 15
           +F   GD++WT   Y+
Sbjct: 127 MFLELGDKEWTEIDYS 142


>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125603599|gb|EAZ42924.1| hypothetical protein
           OsJ_27514 [Oryza sativa Japonica Group]
          Length = 760

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
 Frame = -1

Query: 422 LPPTPGPVPWIIFPCGKGLKSQTFTNILDPLSSYVMSFREIRGKICLLSMHG--WLVMID 249
           LP   G  PW++    +G ++ +F +ILD  S +V    +++GK+CL  +HG  WL+M+D
Sbjct: 14  LPSGFGKKPWLVQ--AQGTETLSFVDILDR-SLHVRVVPDLQGKLCLGCVHGGDWLLMVD 70

Query: 248 YLIEDQCGKEQDFLWNPDTREVINLPLIDSQDASDCCLSILSCVPTNPDCMILLVGV--- 78
             I   C     FL+       I+LP +           +L   P N DC +++  +   
Sbjct: 71  E-ITGGC-----FLFCLSNSSTISLPPLREPLGDMGACVVLGSSPLNRDCTVVITSLPEP 124

Query: 77  KEKFFLFCTPGDEKWTRQSYNLARD 3
           +E F L C PGDE+WT+    L  D
Sbjct: 125 EESFLLHCHPGDEEWTKLMVPLGSD 149


>ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|222859444|gb|EEE96991.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
 Frame = -1

Query: 419 PPTPGPVPWIIFPCGKGLKSQTFTNILDPLSSYVMSFREIRGKICLLSMHGWLVMIDYLI 240
           PP  G +P ++F  G   K QTF +I +    +V +   ++GK+     +GWLV+    I
Sbjct: 18  PPAVGLLPCLVFFHGSSEKGQTFYDISE-CRCHVKNIPGLQGKLIGTCSYGWLVIAGDSI 76

Query: 239 EDQCGKEQDFLWNPDTREVINLP-LIDSQDASDCCLSILSCVPTNPDCMILLV--GVKEK 69
            D C     FL NP + + I LP L      +DC   +LS  P  P+C+++ +  G    
Sbjct: 77  SDDC-----FLLNPISTKKIQLPSLAPDFTWTDC---VLSSPPHRPECVVMFLNFGYGIL 128

Query: 68  FFLFCTPGDEKWTRQSYNL 12
               C PGD +WT Q   L
Sbjct: 129 NVKSCKPGDVEWTGQDLEL 147


>ref|XP_002463935.1| hypothetical protein SORBIDRAFT_01g009190 [Sorghum bicolor]
           gi|241917789|gb|EER90933.1| hypothetical protein
           SORBIDRAFT_01g009190 [Sorghum bicolor]
          Length = 300

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = -1

Query: 365 KSQTFTNILDPLSSYVMSFREIRGKICLLSMHGWLVMIDYLIEDQCGKEQDFLWNPDTRE 186
           +SQ F ++ + LS      R  + + C  +   WL+ +D +        +  LWNP   +
Sbjct: 20  ESQVFVSMFEQLSIKASKCRMPKAR-CWATPQRWLLTLDMI------SFRAALWNPFNLD 72

Query: 185 VINLPLIDSQDASDC-CLSILSCVPTNPDCMILLVGVKEKFFLFCTPGDEKWTRQSYNL 12
            + LP +++    +C CL  LSC P +P C++L+V   E    FC    +KWTR  YN+
Sbjct: 73  KVELPSLENNLPQNCKCL--LSCEPVSPGCVVLVVDADEPVIWFCYVRGKKWTRHEYNI 129


>gb|EAY93475.1| hypothetical protein OsI_15276 [Oryza sativa Indica Group]
          Length = 150

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
 Frame = -1

Query: 443 ANKQSSLLPPTPGPVPWIIFPCGKGLKSQTFTNI-LDPLSSYVMSFREIRGKICLLSMHG 267
           A      LPP  G  PW++    +G +  T T + +  LS +     E+RGK CL  MHG
Sbjct: 3   AKSDDHSLPPGFGTRPWLV----QGSRGDTLTFVDVSDLSLHETVVPEVRGKTCLGCMHG 58

Query: 266 -WLVMIDYLIEDQCGKEQDFLWNPDTREVINLPLIDSQDASDCCLSILSCVPTNPDCMIL 90
            WL+M+D    D C   +    NP T+  +  PL    +    C  + S  P +P+C ++
Sbjct: 59  DWLLMLDESTAD-CFLLR-ITTNPRTKVQLP-PLRQPLEFLSTCEMLES--PESPNCTVV 113

Query: 89  LVGV----KEKFFLFCTPGDEKWTRQSYN 15
                   +E + L C PG+E+WT+  Y+
Sbjct: 114 FSSSAEEEEESYLLHCHPGEEEWTKLVYS 142


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