BLASTX nr result

ID: Coptis21_contig00030190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030190
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22512.3| unnamed protein product [Vitis vinifera]              161   9e-38
ref|XP_002269988.1| PREDICTED: transcription factor bHLH113-like...   161   9e-38
ref|XP_003535697.1| PREDICTED: transcription factor bHLH113-like...   154   1e-35
gb|ABK26980.1| unknown [Picea sitchensis]                             154   1e-35
ref|XP_003555279.1| PREDICTED: transcription factor bHLH113-like...   154   2e-35

>emb|CBI22512.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  161 bits (408), Expect = 9e-38
 Identities = 91/141 (64%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
 Frame = +3

Query: 135 AKA-AGAEQEKQRTKVEXXXXXXXXXXXXXPPSAKPVKVRKEKLGERIAALQQLVSPFGK 311
           AKA AG ++  ++TK E             P S   VKV+KEKLGERI ALQQLVSPFGK
Sbjct: 66  AKAPAGGQRNSKKTKSEN------------PTSGGHVKVKKEKLGERITALQQLVSPFGK 113

Query: 312 TDTASVLHEAMGYIRFLHDQVQVLSSPYLQCSLSSNLIDGRGEEKERK--HDMRSRGLCL 485
           TDTASVLHEAMGYIRFL DQVQVL SPYLQ   SS  +   GE  E K   D+RSRGLCL
Sbjct: 114 TDTASVLHEAMGYIRFLQDQVQVLCSPYLQTLPSSAHMSEGGENGEEKSSKDLRSRGLCL 173

Query: 486 VPIECTTNVANNNGADFWSPA 548
           VP+ECT +VANNNGAD+WSPA
Sbjct: 174 VPVECTEHVANNNGADYWSPA 194


>ref|XP_002269988.1| PREDICTED: transcription factor bHLH113-like [Vitis vinifera]
          Length = 250

 Score =  161 bits (408), Expect = 9e-38
 Identities = 91/141 (64%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
 Frame = +3

Query: 135 AKA-AGAEQEKQRTKVEXXXXXXXXXXXXXPPSAKPVKVRKEKLGERIAALQQLVSPFGK 311
           AKA AG ++  ++TK E             P S   VKV+KEKLGERI ALQQLVSPFGK
Sbjct: 114 AKAPAGGQRNSKKTKSEN------------PTSGGHVKVKKEKLGERITALQQLVSPFGK 161

Query: 312 TDTASVLHEAMGYIRFLHDQVQVLSSPYLQCSLSSNLIDGRGEEKERK--HDMRSRGLCL 485
           TDTASVLHEAMGYIRFL DQVQVL SPYLQ   SS  +   GE  E K   D+RSRGLCL
Sbjct: 162 TDTASVLHEAMGYIRFLQDQVQVLCSPYLQTLPSSAHMSEGGENGEEKSSKDLRSRGLCL 221

Query: 486 VPIECTTNVANNNGADFWSPA 548
           VP+ECT +VANNNGAD+WSPA
Sbjct: 222 VPVECTEHVANNNGADYWSPA 242


>ref|XP_003535697.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
          Length = 282

 Score =  154 bits (390), Expect = 1e-35
 Identities = 83/120 (69%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
 Frame = +3

Query: 222 PPSAKPVKVRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLSSPYLQ 401
           P S    K RKEKLGERIA LQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL SPYLQ
Sbjct: 150 PTSTGHAKQRKEKLGERIATLQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQ 209

Query: 402 CSLSS---NLIDGRG-EEKERKHDMRSRGLCLVPIECTTNVANNNGADFWSPANMGRNVS 569
              SS   N   G G  E+E   D+RS+GLCL+P+ CT +VA +NGADFWS A +G NVS
Sbjct: 210 SLPSSYHQNQHGGGGNNEEEVNKDLRSKGLCLIPVGCTVHVAGSNGADFWSSAAIGNNVS 269


>gb|ABK26980.1| unknown [Picea sitchensis]
          Length = 355

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = +3

Query: 237 PVKVRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLSSPYLQCSLSS 416
           P+KVRKEKLGERI ALQQLVSPFGKTDTASVL EAMGYI+FL DQVQVLSSPYL+  + S
Sbjct: 248 PMKVRKEKLGERITALQQLVSPFGKTDTASVLLEAMGYIKFLQDQVQVLSSPYLK-GIPS 306

Query: 417 NLIDGRGEEKERKHDMRSRGLCLVPIECTTNVANNNGADFWS 542
           N  DGRG+  + K+D+RSRGLCLVP+ CT +VANNNGADFW+
Sbjct: 307 NQKDGRGD--QAKYDLRSRGLCLVPVSCTLHVANNNGADFWT 346


>ref|XP_003555279.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
          Length = 277

 Score =  154 bits (388), Expect = 2e-35
 Identities = 81/120 (67%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
 Frame = +3

Query: 222 PPSAKPVKVRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLSSPYLQ 401
           P S    K RKEKLGERIAALQQLVSPF KTDTASVLHEAMGYIRFLHDQVQVL SPYLQ
Sbjct: 145 PTSTGHAKQRKEKLGERIAALQQLVSPFSKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQ 204

Query: 402 CSLSSNLIDGRGE----EKERKHDMRSRGLCLVPIECTTNVANNNGADFWSPANMGRNVS 569
              SS   +  G+    E+E   D+RSRGLCL+P+ CT +VA +NGADFWS A +G NV+
Sbjct: 205 SLPSSYHQNQHGDGVINEEEVNKDLRSRGLCLIPVGCTVHVAGSNGADFWSSAAIGNNVN 264


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