BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030162
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   135   4e-30
ref|XP_002513583.1| pentatricopeptide repeat-containing protein,...   132   4e-29
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26

>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/127 (52%), Positives = 88/127 (69%)
 Frame = -3

Query: 389 SGETNPNEFTFDTVLRSIGELGVLKEGKIVHGLCIIFGFEFDQSIGGALIALYSSCDAIE 210
           SGET PNEFTFD V+R+ G LG+L  G+ VHGL +  G E+D SIGGAL+  Y  C+AI+
Sbjct: 225 SGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAID 284

Query: 209 DAKKVYEGLRYPCXXXXXXXXXXXXSMGRIEEAETIFDVLVESLLVSYNLMIEGYAVSGR 30
           DA +V +G+  PC            SMGRIE+AE +F+ + E   VSYNLMI+GYAV G+
Sbjct: 285 DALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQ 344

Query: 29  VDDSKKV 9
           +DDSK++
Sbjct: 345 MDDSKRL 351


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/127 (52%), Positives = 88/127 (69%)
 Frame = -3

Query: 389 SGETNPNEFTFDTVLRSIGELGVLKEGKIVHGLCIIFGFEFDQSIGGALIALYSSCDAIE 210
           SGET PNEFTFD V+R+ G LG+L  G+ VHGL +  G E+D SIGGAL+  Y  C+AI+
Sbjct: 265 SGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAID 324

Query: 209 DAKKVYEGLRYPCXXXXXXXXXXXXSMGRIEEAETIFDVLVESLLVSYNLMIEGYAVSGR 30
           DA +V +G+  PC            SMGRIE+AE +F+ + E   VSYNLMI+GYAV G+
Sbjct: 325 DALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQ 384

Query: 29  VDDSKKV 9
           +DDSK++
Sbjct: 385 MDDSKRL 391


>ref|XP_002513583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547491|gb|EEF48986.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/125 (49%), Positives = 84/125 (67%)
 Frame = -3

Query: 389 SGETNPNEFTFDTVLRSIGELGVLKEGKIVHGLCIIFGFEFDQSIGGALIALYSSCDAIE 210
           SGE  PNEFT D+V+R  G+LG L EG +VHG+ I  GFEFDQSI GAL+  Y  C+AI+
Sbjct: 228 SGEVLPNEFTLDSVIRVCGKLGALSEGMVVHGILIKTGFEFDQSISGALVQFYCDCEAID 287

Query: 209 DAKKVYEGLRYPCXXXXXXXXXXXXSMGRIEEAETIFDVLVESLLVSYNLMIEGYAVSGR 30
           DAK++Y+G+ YPC             +GRI++A+ IF+   E      NLM++ Y++SGR
Sbjct: 288 DAKRIYDGIAYPCSSASNSLIEGYVLLGRIKDADLIFNRATEKNSALCNLMVKAYSMSGR 347

Query: 29  VDDSK 15
           V+DSK
Sbjct: 348 VEDSK 352


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/127 (46%), Positives = 80/127 (62%)
 Frame = -3

Query: 389 SGETNPNEFTFDTVLRSIGELGVLKEGKIVHGLCIIFGFEFDQSIGGALIALYSSCDAIE 210
           +GE  PNEFTFD+V+R+ G +  L  GK+VHG+   +GF FD S+  ALI  Y  C+AI+
Sbjct: 230 NGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAID 289

Query: 209 DAKKVYEGLRYPCXXXXXXXXXXXXSMGRIEEAETIFDVLVESLLVSYNLMIEGYAVSGR 30
           +AK VY+ +  PC              GRI +AE IF  L E   VSYNLM++GYA SGR
Sbjct: 290 NAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGR 349

Query: 29  VDDSKKV 9
           ++ SK++
Sbjct: 350 IEGSKRL 356


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/127 (46%), Positives = 79/127 (62%)
 Frame = -3

Query: 389 SGETNPNEFTFDTVLRSIGELGVLKEGKIVHGLCIIFGFEFDQSIGGALIALYSSCDAIE 210
           +GE  PNEFTFD+V+R+ G +  L  GK+VHG+   +GF FD S+  ALI  Y  C+AI+
Sbjct: 230 NGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAID 289

Query: 209 DAKKVYEGLRYPCXXXXXXXXXXXXSMGRIEEAETIFDVLVESLLVSYNLMIEGYAVSGR 30
            AK VY+ +  PC              GRI +AE IF  L E   VSYNLM++GYA SGR
Sbjct: 290 SAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGR 349

Query: 29  VDDSKKV 9
           ++ SK++
Sbjct: 350 IEGSKRL 356