BLASTX nr result

ID: Coptis21_contig00030152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030152
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527179.1| PREDICTED: signal recognition particle recep...   112   4e-23
ref|XP_002529394.1| signal recognition particle receptor alpha s...   111   9e-23
ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_004167396.1| PREDICTED: signal recognition particle recep...   109   5e-22

>ref|XP_003527179.1| PREDICTED: signal recognition particle receptor subunit alpha-like
           [Glycine max]
          Length = 623

 Score =  112 bits (281), Expect = 4e-23
 Identities = 57/63 (90%), Positives = 58/63 (92%)
 Frame = +1

Query: 286 RLADLATSPNARLIDGILLTKFDTIDDKVGAALSMVYRSGAPVMFVGCGQSYIHLKKLNV 465
           +LADLATSPN RLIDGILLTKFDTIDDKVGAALSMVY SGAPVMFVGCGQSY  LKKLNV
Sbjct: 555 KLADLATSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNV 614

Query: 466 KGI 474
           K I
Sbjct: 615 KSI 617


>ref|XP_002529394.1| signal recognition particle receptor alpha subunit, putative
           [Ricinus communis] gi|223531142|gb|EEF32990.1| signal
           recognition particle receptor alpha subunit, putative
           [Ricinus communis]
          Length = 618

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/63 (88%), Positives = 58/63 (92%)
 Frame = +1

Query: 286 RLADLATSPNARLIDGILLTKFDTIDDKVGAALSMVYRSGAPVMFVGCGQSYIHLKKLNV 465
           +LADL+TSPN RLIDGILLTKFDTIDDKVGAALSMVY SGAPVMFVGCGQSY  LKKLNV
Sbjct: 550 KLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNV 609

Query: 466 KGI 474
           K I
Sbjct: 610 KSI 612


>ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|222865971|gb|EEF03102.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/63 (87%), Positives = 58/63 (92%)
 Frame = +1

Query: 286 RLADLATSPNARLIDGILLTKFDTIDDKVGAALSMVYRSGAPVMFVGCGQSYIHLKKLNV 465
           +LADL+TSPN RLIDGILLTKFDTIDDKVGAALSMVY SG+PVMFVGCGQSY  LKKLNV
Sbjct: 244 KLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 303

Query: 466 KGI 474
           K I
Sbjct: 304 KAI 306


>ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|222855326|gb|EEE92873.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/63 (87%), Positives = 58/63 (92%)
 Frame = +1

Query: 286 RLADLATSPNARLIDGILLTKFDTIDDKVGAALSMVYRSGAPVMFVGCGQSYIHLKKLNV 465
           +LADL+TSPN RLIDGILLTKFDTIDDKVGAALSMVY SG+PVMFVGCGQSY  LKKLNV
Sbjct: 556 KLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 615

Query: 466 KGI 474
           K I
Sbjct: 616 KAI 618


>ref|XP_004167396.1| PREDICTED: signal recognition particle receptor subunit alpha
           homolog, partial [Cucumis sativus]
          Length = 356

 Score =  109 bits (272), Expect = 5e-22
 Identities = 55/63 (87%), Positives = 57/63 (90%)
 Frame = +1

Query: 286 RLADLATSPNARLIDGILLTKFDTIDDKVGAALSMVYRSGAPVMFVGCGQSYIHLKKLNV 465
           +LADL+TSP  RLIDGILLTKFDTIDDKVGAALSMVY SGAPVMFVGCGQSY  LKKLNV
Sbjct: 288 KLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNV 347

Query: 466 KGI 474
           K I
Sbjct: 348 KSI 350


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