BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030150
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   175   5e-42
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...   175   7e-42
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   172   4e-41
ref|NP_194257.1| pentatricopeptide repeat-containing protein [Ar...   171   1e-40
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   170   2e-40

>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = -1

Query: 631 HLGLVEDGRELFVKMKNRYGIKPRMEHYACMVNLLGRAGLINDAYDIVVKQMEFDAGPTV 452
           HLGLV+DG  LF  M+  YG+ P MEHYACMVNL GRAGLI +AY+I+ K+MEF+AGPTV
Sbjct: 390 HLGLVKDGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEIIEKRMEFEAGPTV 449

Query: 451 WGALLYACSVHGNVDVGETAAARLFDLEPDNAHIFELLIKIYGNAGRWDKVEKVMQSMAD 272
           WGALLYAC  H NVD+G+ AA  LF+LEPDN H FELL+ IY N GR + VEKV + MAD
Sbjct: 450 WGALLYACYFHHNVDIGKIAAECLFELEPDNEHNFELLMNIYRNVGRLEDVEKVRKMMAD 509

Query: 271 RGLDS 257
           RG DS
Sbjct: 510 RGFDS 514


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  175 bits (443), Expect = 7e-42
 Identities = 85/123 (69%), Positives = 96/123 (78%)
 Frame = -1

Query: 631 HLGLVEDGRELFVKMKNRYGIKPRMEHYACMVNLLGRAGLINDAYDIVVKQMEFDAGPTV 452
           HLGLV+DG  LF  MK +Y I P MEHYACMVNL GRAGLIN+AY I+  QMEF+AGPTV
Sbjct: 320 HLGLVKDGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQMEFEAGPTV 379

Query: 451 WGALLYACSVHGNVDVGETAAARLFDLEPDNAHIFELLIKIYGNAGRWDKVEKVMQSMAD 272
           WGALLY+C +H NVD GE AA  LFDLEPDN H FELL+KIY NAGR +  E+V + M D
Sbjct: 380 WGALLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLEDAERVRKMMVD 439

Query: 271 RGL 263
           RGL
Sbjct: 440 RGL 442


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
            lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
            ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  172 bits (437), Expect = 4e-41
 Identities = 77/123 (62%), Positives = 98/123 (79%)
 Frame = -1

Query: 625  GLVEDGRELFVKMKNRYGIKPRMEHYACMVNLLGRAGLINDAYDIVVKQMEFDAGPTVWG 446
            G+VEDG  LF  M   YGI P+MEHYACMVNL GRAG++ +AY ++V++MEF+AGPTVWG
Sbjct: 636  GMVEDGERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEEAYSMIVQEMEFEAGPTVWG 695

Query: 445  ALLYACSVHGNVDVGETAAARLFDLEPDNAHIFELLIKIYGNAGRWDKVEKVMQSMADRG 266
            ALLYAC +HGN D+GE +A RLF+LEPDN H FELL++IY  A R + VE+V Q + DRG
Sbjct: 696  ALLYACYLHGNTDIGEVSAQRLFELEPDNEHNFELLMRIYSKAKRAEDVERVRQMLVDRG 755

Query: 265  LDS 257
            L++
Sbjct: 756  LET 758


>ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 527

 Score =  171 bits (432), Expect = 1e-40
 Identities = 78/123 (63%), Positives = 96/123 (78%)
 Frame = -1

Query: 625 GLVEDGRELFVKMKNRYGIKPRMEHYACMVNLLGRAGLINDAYDIVVKQMEFDAGPTVWG 446
           G+VEDG  LF  M   YGI P+MEHYACMVNL GRAG++ +AY ++V++M  +AGPTVWG
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWG 464

Query: 445 ALLYACSVHGNVDVGETAAARLFDLEPDNAHIFELLIKIYGNAGRWDKVEKVMQSMADRG 266
           ALLYAC +HGN D+GE AA RLF+LEPDN H FELLI+IY  A R + VE+V Q M DRG
Sbjct: 465 ALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRG 524

Query: 265 LDS 257
           L++
Sbjct: 525 LET 527


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  170 bits (430), Expect = 2e-40
 Identities = 79/125 (63%), Positives = 100/125 (80%)
 Frame = -1

Query: 631 HLGLVEDGRELFVKMKNRYGIKPRMEHYACMVNLLGRAGLINDAYDIVVKQMEFDAGPTV 452
           HLGLV++G EL+  MK +YGI+P +EHYACMVNL GRAG+I +AY I+ K ME +AGPT+
Sbjct: 365 HLGLVKEGXELYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKIITKGMEIEAGPTI 424

Query: 451 WGALLYACSVHGNVDVGETAAARLFDLEPDNAHIFELLIKIYGNAGRWDKVEKVMQSMAD 272
           WGALLYAC +H +VD+ E AA RLF+LEPDN   FELL+KIYGNAGR +  ++V   MA+
Sbjct: 425 WGALLYACYLHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEKRVKLMMAE 484

Query: 271 RGLDS 257
           RGL+S
Sbjct: 485 RGLNS 489