BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030138
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   102   3e-20
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              102   3e-20
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   102   3e-20
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...    98   6e-19
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...    96   4e-18

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -3

Query: 252  QTVSLFLSKKLERWLYGPEYGALTVRSHLERVLFSDIVSSVMIIFSQQRSCQPHTSPWVC 73
            +TVSLFLSKKLE+  +G EYGAL V++HLE++LFSDIVS+VMI+FS Q   + H SPWVC
Sbjct: 967  RTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVC 1026

Query: 72   HFHLHQGKMKKIGLDVQSIINALH 1
            HFH+ +   KK  L   SII+AL+
Sbjct: 1027 HFHVCEEIAKKRSLKPHSIIDALY 1050


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -3

Query: 252  QTVSLFLSKKLERWLYGPEYGALTVRSHLERVLFSDIVSSVMIIFSQQRSCQPHTSPWVC 73
            +TVSLFLSKKLE+  +G EYGAL V++HLE++LFSDIVS+VMI+FS Q   + H SPWVC
Sbjct: 836  RTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVC 895

Query: 72   HFHLHQGKMKKIGLDVQSIINALH 1
            HFH+ +   KK  L   SII+AL+
Sbjct: 896  HFHVCEEIAKKRSLKPHSIIDALY 919


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -3

Query: 252  QTVSLFLSKKLERWLYGPEYGALTVRSHLERVLFSDIVSSVMIIFSQQRSCQPHTSPWVC 73
            +TVSLFLSKKLE+  +G EYGAL V++HLE++LFSDIVS+VMI+FS Q   + H SPWVC
Sbjct: 1082 RTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVC 1141

Query: 72   HFHLHQGKMKKIGLDVQSIINALH 1
            HFH+ +   KK  L   SII+AL+
Sbjct: 1142 HFHVCEEIAKKRSLKPHSIIDALY 1165


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -3

Query: 252  QTVSLFLSKKLERWLYGPEYGALTVRSHLERVLFSDIVSSVMIIFSQQRSCQPHTSPWVC 73
            QT SLFLS+KL +  YG EYGAL V++HLERV+F DIVSSVMIIFS   S + H SPWVC
Sbjct: 945  QTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHFSPWVC 1004

Query: 72   HFHLHQGKMKKIGLDVQSIINALH 1
            HFH+ +  +KK  L + S+I++L+
Sbjct: 1005 HFHVCKEILKKRRLKMNSVIHSLN 1028


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/83 (60%), Positives = 62/83 (74%)
 Frame = -3

Query: 252  QTVSLFLSKKLERWLYGPEYGALTVRSHLERVLFSDIVSSVMIIFSQQRSCQPHTSPWVC 73
            QT+SLFLS+KL R  +G EY AL V++HLER+LFSDIVS V IIFS Q   + H SPWVC
Sbjct: 982  QTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMHFSPWVC 1041

Query: 72   HFHLHQGKMKKIGLDVQSIINAL 4
            HFH+++  +KK  L V  II+AL
Sbjct: 1042 HFHVYKEIVKKRSLKVHYIIDAL 1064