BLASTX nr result

ID: Coptis21_contig00030135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030135
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   174   7e-42
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   161   5e-38
ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosyl...   160   1e-37

>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/152 (59%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
 Frame = +2

Query: 5   KQRLEFCAVCVVEILDDQCPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVL 184
           K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA  
Sbjct: 288 KKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLDGEADG 345

Query: 185 TVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGASF 364
             RR+ ID++LK SFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LKGG   
Sbjct: 346 ATRRKRIDRFLK-SFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLKGGMKI 404

Query: 365 FYGKEE----AWKCVDSHSIQSIGLTSGVRKV 448
            Y  E+     W+ +DS ++ S+GLTSGVRKV
Sbjct: 405 SYENEDKETMTWRWIDSEALSSMGLTSGVRKV 436


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/152 (59%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
 Frame = +2

Query: 5   KQRLEFCAVCVVEILDDQCPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVL 184
           K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA  
Sbjct: 330 KKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLDGEADG 387

Query: 185 TVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGASF 364
             RR+ ID++LK SFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LKGG   
Sbjct: 388 ATRRKRIDRFLK-SFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLKGGMKI 446

Query: 365 FYGKEE----AWKCVDSHSIQSIGLTSGVRKV 448
            Y  E+     W+ +DS ++ S+GLTSGVRKV
Sbjct: 447 SYENEDKETMTWRWIDSEALSSMGLTSGVRKV 478


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/152 (57%), Positives = 113/152 (74%), Gaps = 4/152 (2%)
 Frame = +2

Query: 5   KQRLEFCAVCVVEILDDQCPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVL 184
           KQR EF AVC VEI   Q  D   G + ++VFLLVKRPDEGLLAGLWEFPSV++  EA +
Sbjct: 292 KQRHEFSAVCAVEITGRQ--DLIEGDQSSSVFLLVKRPDEGLLAGLWEFPSVMLGKEADM 349

Query: 185 TVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGASF 364
           T RR+ ++++LKKSF+LD +K C++L R  +GE +HIF+HIRL++YVELLI+ LKG  S 
Sbjct: 350 TRRRKEMNRFLKKSFRLDPQKTCSVLLREDIGEFIHIFTHIRLKVYVELLIVHLKGDMSD 409

Query: 365 FYGKEE----AWKCVDSHSIQSIGLTSGVRKV 448
            + K+      WKCVD  ++ S+GLTSGVRKV
Sbjct: 410 LFSKQSRENMTWKCVDREALSSLGLTSGVRKV 441


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  161 bits (408), Expect = 5e-38
 Identities = 91/174 (52%), Positives = 116/174 (66%), Gaps = 26/174 (14%)
 Frame = +2

Query: 5    KQRLEFCAVCVVEILDDQCPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVL 184
            K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+DGEA  
Sbjct: 833  KKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLDGEADG 890

Query: 185  TVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLK----- 349
              RR+ ID++L KSFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LK     
Sbjct: 891  ATRRKRIDRFL-KSFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLKGLGLL 949

Query: 350  -----------------GGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKV 448
                             GG    Y  E+     W+ +DS ++ S+GLTSGVRKV
Sbjct: 950  INSHSQICMSVYVSLYPGGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKV 1003


>ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Glycine max]
          Length = 471

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/151 (52%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
 Frame = +2

Query: 5   KQRLEFCAVCVVEILDDQCPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEAVL 184
           KQR +F AVCVVE++     +T    + ++ F+LVKRP+EGLLAGLWEFPSVL+DGEAV 
Sbjct: 295 KQRCDFSAVCVVELVG---AETLNKNQSSSKFILVKRPEEGLLAGLWEFPSVLLDGEAVP 351

Query: 185 TVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGASF 364
             RR+A+D++L+K+ K+D +K C I+ R  +GE +HIFSHIRL++YVELL+L+LK G   
Sbjct: 352 LARREAMDRFLEKNLKIDIRKTCNIVLREDIGEFVHIFSHIRLKLYVELLVLQLKVGVDD 411

Query: 365 FY---GKEEAWKCVDSHSIQSIGLTSGVRKV 448
            +     +  WKCV S+++ S+GLT+ VRKV
Sbjct: 412 LFKSPDNKTTWKCVYSNALSSMGLTTSVRKV 442


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