BLASTX nr result
ID: Coptis21_contig00030128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030128 (456 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera] 86 2e-15 ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vi... 85 5e-15 ref|XP_002515371.1| sensor histidine kinase, putative [Ricinus c... 67 2e-09 >emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera] Length = 979 Score = 86.3 bits (212), Expect = 2e-15 Identities = 57/155 (36%), Positives = 75/155 (48%), Gaps = 3/155 (1%) Frame = -1 Query: 456 SSGMHKSPPITCGYDPLKKLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKS 277 S K PP GYD L KL LS+ Y FP + ++E SL DACS ++ S+ Sbjct: 685 SGRTQKLPPNNIGYDSLHKLNGLSDDSYSFPFNKVTSKEMTSLEDACSVVDAAETLSEPE 744 Query: 276 S--GRDLEHDKTNGLRGGKQCXXXXXXXXXXXXXXXXYRD-ICVDVDNKDTSSKSQNVCK 106 S + E D N + GK+C + + +VD +S++ +C Sbjct: 745 SLLRHNAEPDNDNAVSRGKKCQDEANGQVHNHSXGSTHHSKVSKEVDEMGKTSEAPEMCL 804 Query: 105 RQEHESRSSQITSGSDTESSTSNLKPKILLVEDNK 1 R E RSSQ TS S E S LKPKILLVED+K Sbjct: 805 RLEISERSSQCTSSSSPEXPKSTLKPKILLVEDSK 839 >ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vinifera] Length = 1012 Score = 85.1 bits (209), Expect = 5e-15 Identities = 55/155 (35%), Positives = 73/155 (47%), Gaps = 3/155 (1%) Frame = -1 Query: 456 SSGMHKSPPITCGYDPLKKLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKS 277 S K PP GYD L KL LS+ Y FP + ++E SL D CS ++ S+ Sbjct: 718 SGRTQKLPPNNIGYDSLHKLNGLSDDSYSFPFNKVTSKEMTSLEDTCSVVDAAETLSEPE 777 Query: 276 S--GRDLEHDKTNGLRGGKQCXXXXXXXXXXXXXXXXYRD-ICVDVDNKDTSSKSQNVCK 106 S + E D N + GK+C + + +VD +S++ +C Sbjct: 778 SLLRHNAEPDNDNAVSRGKKCQDEANGQVHNHSTGSTHHSKVSKEVDEMGKTSEAPEMCL 837 Query: 105 RQEHESRSSQITSGSDTESSTSNLKPKILLVEDNK 1 R E RSSQ TS S E S LKPKILLVED+K Sbjct: 838 RLEISERSSQCTSSSSPEEPKSTLKPKILLVEDSK 872 >ref|XP_002515371.1| sensor histidine kinase, putative [Ricinus communis] gi|223545315|gb|EEF46820.1| sensor histidine kinase, putative [Ricinus communis] Length = 930 Score = 66.6 bits (161), Expect = 2e-09 Identities = 48/135 (35%), Positives = 60/135 (44%), Gaps = 2/135 (1%) Frame = -1 Query: 402 KLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKSSG--RDLEHDKTNGLRGG 229 KL LS+ Y FPSSN +ET S+ DACS D+ S+ S E D N Sbjct: 676 KLNGLSDNLYSFPSSNVRLKETASVEDACSTVEVADTLSEPESSYSHSPEPDNENVACRS 735 Query: 228 KQCXXXXXXXXXXXXXXXXYRDICVDVDNKDTSSKSQNVCKRQEHESRSSQITSGSDTES 49 KQ + + C +VD + + Q C QE SSQ T G + Sbjct: 736 KQFQDDSSQLHNCTMVSTCHVEPCREVDAQAIEREPQGSCFAQEKSDISSQPTCGRSPQV 795 Query: 48 STSNLKPKILLVEDN 4 S L+PKILLVEDN Sbjct: 796 PMSKLQPKILLVEDN 810