BLASTX nr result

ID: Coptis21_contig00030128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030128
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera]    86   2e-15
ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vi...    85   5e-15
ref|XP_002515371.1| sensor histidine kinase, putative [Ricinus c...    67   2e-09

>emb|CAN76109.1| hypothetical protein VITISV_033090 [Vitis vinifera]
          Length = 979

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/155 (36%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
 Frame = -1

Query: 456  SSGMHKSPPITCGYDPLKKLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKS 277
            S    K PP   GYD L KL  LS+  Y FP +   ++E  SL DACS     ++ S+  
Sbjct: 685  SGRTQKLPPNNIGYDSLHKLNGLSDDSYSFPFNKVTSKEMTSLEDACSVVDAAETLSEPE 744

Query: 276  S--GRDLEHDKTNGLRGGKQCXXXXXXXXXXXXXXXXYRD-ICVDVDNKDTSSKSQNVCK 106
            S    + E D  N +  GK+C                +   +  +VD    +S++  +C 
Sbjct: 745  SLLRHNAEPDNDNAVSRGKKCQDEANGQVHNHSXGSTHHSKVSKEVDEMGKTSEAPEMCL 804

Query: 105  RQEHESRSSQITSGSDTESSTSNLKPKILLVEDNK 1
            R E   RSSQ TS S  E   S LKPKILLVED+K
Sbjct: 805  RLEISERSSQCTSSSSPEXPKSTLKPKILLVEDSK 839


>ref|XP_002271743.2| PREDICTED: histidine kinase 5-like [Vitis vinifera]
          Length = 1012

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 55/155 (35%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
 Frame = -1

Query: 456  SSGMHKSPPITCGYDPLKKLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKS 277
            S    K PP   GYD L KL  LS+  Y FP +   ++E  SL D CS     ++ S+  
Sbjct: 718  SGRTQKLPPNNIGYDSLHKLNGLSDDSYSFPFNKVTSKEMTSLEDTCSVVDAAETLSEPE 777

Query: 276  S--GRDLEHDKTNGLRGGKQCXXXXXXXXXXXXXXXXYRD-ICVDVDNKDTSSKSQNVCK 106
            S    + E D  N +  GK+C                +   +  +VD    +S++  +C 
Sbjct: 778  SLLRHNAEPDNDNAVSRGKKCQDEANGQVHNHSTGSTHHSKVSKEVDEMGKTSEAPEMCL 837

Query: 105  RQEHESRSSQITSGSDTESSTSNLKPKILLVEDNK 1
            R E   RSSQ TS S  E   S LKPKILLVED+K
Sbjct: 838  RLEISERSSQCTSSSSPEEPKSTLKPKILLVEDSK 872


>ref|XP_002515371.1| sensor histidine kinase, putative [Ricinus communis]
            gi|223545315|gb|EEF46820.1| sensor histidine kinase,
            putative [Ricinus communis]
          Length = 930

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 48/135 (35%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
 Frame = -1

Query: 402  KLKNLSEKPYFFPSSNGITRETFSLGDACSATADVDSFSKKSSG--RDLEHDKTNGLRGG 229
            KL  LS+  Y FPSSN   +ET S+ DACS     D+ S+  S      E D  N     
Sbjct: 676  KLNGLSDNLYSFPSSNVRLKETASVEDACSTVEVADTLSEPESSYSHSPEPDNENVACRS 735

Query: 228  KQCXXXXXXXXXXXXXXXXYRDICVDVDNKDTSSKSQNVCKRQEHESRSSQITSGSDTES 49
            KQ                 + + C +VD +    + Q  C  QE    SSQ T G   + 
Sbjct: 736  KQFQDDSSQLHNCTMVSTCHVEPCREVDAQAIEREPQGSCFAQEKSDISSQPTCGRSPQV 795

Query: 48   STSNLKPKILLVEDN 4
              S L+PKILLVEDN
Sbjct: 796  PMSKLQPKILLVEDN 810


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