BLASTX nr result

ID: Coptis21_contig00030111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030111
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago trun...   115   4e-24
ref|XP_004163873.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   114   6e-24
ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   114   6e-24
emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]   112   2e-23
ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23

>ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 562

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = -2

Query: 332 LALGLSNLGLKPGHVVAIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILE 153
           LA GL  LG+ PG VVAI+A NSD+YLEW+LA+A++G I +PLNYRWS EEA+ A++ ++
Sbjct: 40  LAHGLLQLGVTPGDVVAISAYNSDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVK 99

Query: 152 PEMLVVDDSCAIWYFELQTYN--SLRWHVCLGDP 57
           P MLV+D+SC  WYF+ Q  +   L+WHV L  P
Sbjct: 100 PVMLVIDESCYSWYFKFQQNDVPFLKWHVLLDSP 133


>ref|XP_004163873.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like [Cucumis sativus]
          Length = 572

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -2

Query: 332 LALGLSNLGLKPGHVVAIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILE 153
           LA GL +LGL PG VV I+A NSD YLEW+LAVA++GAI +PLNYRWS EEA SA+  ++
Sbjct: 45  LARGLLDLGLLPGDVVVISAFNSDWYLEWLLAVAFVGAIAAPLNYRWSFEEALSAMVAVQ 104

Query: 152 PEMLVVDDSCAIWYFELQTYN--SLRWHVCLGDPLP 51
           P MLV+D+    WY +LQ  +  SLRWHV +G  LP
Sbjct: 105 PVMLVIDEGGCQWYSKLQNNHIPSLRWHVFIGSHLP 140


>ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like [Cucumis sativus]
          Length = 564

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
 Frame = -2

Query: 332 LALGLSNLGLKPGHVVAIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILE 153
           LA GL +LGL PG VV I+A NSD YLEW+LAVA++GAI +PLNYRWS EEA SA+  ++
Sbjct: 45  LARGLLDLGLLPGDVVVISAFNSDWYLEWLLAVAFVGAIAAPLNYRWSFEEALSAMVAVQ 104

Query: 152 PEMLVVDDSCAIWYFELQTYN--SLRWHVCLGDPLP 51
           P MLV+D+    WY +LQ  +  SLRWHV +G  LP
Sbjct: 105 PVMLVIDEGGCQWYSKLQNNHIPSLRWHVFIGSHLP 140


>emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
          Length = 520

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/89 (59%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -2

Query: 332 LALGLSNLGLKPGHVVAIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILE 153
           LA GL +LG++ GHVVAI+ALNSD YLE  LAVA++G +++PLNYRWS EEAR A+E+++
Sbjct: 45  LAQGLLDLGVRSGHVVAISALNSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVK 104

Query: 152 PEMLVVDDSCAIWYFELQTYN--SLRWHV 72
           P ML+ D SC+ WY +L+  +  SLRWHV
Sbjct: 105 PVMLITDSSCSYWYPKLENDHLPSLRWHV 133


>ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|222872160|gb|EEF09291.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = -2

Query: 332 LALGLSNLGLKPGHVVAIAALNSDIYLEWMLAVAYIGAIISPLNYRWSLEEARSALEILE 153
           LA GL  LGL  G +VAI   NSD YLEW+LAVA++G I++PLNYRWS EEA+SA+ ++ 
Sbjct: 45  LAHGLLQLGLGNGDIVAICGFNSDWYLEWLLAVAFVGGIVAPLNYRWSFEEAKSAMLMVR 104

Query: 152 PEMLVVDDSCAIWYFELQT--YNSLRWHVCLGDP 57
           P ML+ D+SC  WY ELQ+    S++WHV  G P
Sbjct: 105 PVMLITDESCKHWYQELQSNALPSVKWHVFSGSP 138


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