BLASTX nr result

ID: Coptis21_contig00030087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030087
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19342.3| unnamed protein product [Vitis vinifera]              255   2e-66
ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...   255   2e-66
ref|XP_004167717.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...   244   7e-63
ref|XP_004141418.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cu...   244   7e-63
ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl...   243   9e-63

>emb|CBI19342.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  255 bits (652), Expect = 2e-66
 Identities = 125/173 (72%), Positives = 146/173 (84%)
 Frame = -2

Query: 519 AGSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEG 340
           +GSLQG+A V ATLKLEY+ S+T++LF+GR SV +++W+KLEGTF+L T+PDRVVFYLEG
Sbjct: 138 SGSLQGSAVVQATLKLEYQGSATSYLFIGRTSVSREQWKKLEGTFSLSTMPDRVVFYLEG 197

Query: 339 PSPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRGCKIAVH 160
           PSPG+DLLI+       S  E E+ +  C   GDENIILNP FEDG+NNWSGRGCKI +H
Sbjct: 198 PSPGLDLLIESVVIFCSSPTEEESSSTRCAAAGDENIILNPIFEDGVNNWSGRGCKILLH 257

Query: 159 DSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRIFG 1
           DSMG GKI+P SGKFFASATERTQ+WNGIQQEITGRVQRKL YEVAAVVRIFG
Sbjct: 258 DSMGGGKIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVRIFG 310



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
 Frame = -2

Query: 501 AAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEGPSPGVD 322
           +A+V  TL ++       ++ V        +W +L+G F L   P RVV YLEGP PG D
Sbjct: 315 SADVRVTLWVQTPNLREQYIGVANSQATDKDWIQLQGKFLLNASPSRVVIYLEGPPPGTD 374

Query: 321 LLIDXXXXXXXSNKESETVNGTCHTDGDE-----NIILNPQFEDGLNNWSGRG-CKIAVH 160
           +L++         K +E +  +     ++     N I N    DG N W   G C ++V 
Sbjct: 375 ILVNSLVV-----KHAEKIPPSPPPVIEDPAFGINTIQNSNLNDGSNGWFPLGSCTLSV- 428

Query: 159 DSMGDGKILPSSGK-----------FFASATERTQNWNGIQQEITGRVQRKLVYEVAAVV 13
            + G  +ILP   +            +   T RTQ W G  Q IT RV+  L Y+V+A V
Sbjct: 429 -ATGSPRILPPMARDSLGAHNPLSGHYILVTNRTQTWMGPAQMITDRVKLYLTYQVSAWV 487

Query: 12  RI 7
           RI
Sbjct: 488 RI 489


>ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 981

 Score =  255 bits (652), Expect = 2e-66
 Identities = 125/173 (72%), Positives = 146/173 (84%)
 Frame = -2

Query: 519 AGSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEG 340
           +GSLQG+A V ATLKLEY+ S+T++LF+GR SV +++W+KLEGTF+L T+PDRVVFYLEG
Sbjct: 172 SGSLQGSAVVQATLKLEYQGSATSYLFIGRTSVSREQWKKLEGTFSLSTMPDRVVFYLEG 231

Query: 339 PSPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRGCKIAVH 160
           PSPG+DLLI+       S  E E+ +  C   GDENIILNP FEDG+NNWSGRGCKI +H
Sbjct: 232 PSPGLDLLIESVVIFCSSPTEEESSSTRCAAAGDENIILNPIFEDGVNNWSGRGCKILLH 291

Query: 159 DSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRIFG 1
           DSMG GKI+P SGKFFASATERTQ+WNGIQQEITGRVQRKL YEVAAVVRIFG
Sbjct: 292 DSMGGGKIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVRIFG 344



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
 Frame = -2

Query: 501 AAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEGPSPGVD 322
           +A+V  TL ++       ++ V        +W +L+G F L   P RVV YLEGP PG D
Sbjct: 349 SADVRVTLWVQTPNLREQYIGVANSQATDKDWIQLQGKFLLNASPSRVVIYLEGPPPGTD 408

Query: 321 LLIDXXXXXXXSNKESETVNGTCHTDGDE-----NIILNPQFEDGLNNWSGRG-CKIAVH 160
           +L++         K +E +  +     ++     N I N    DG N W   G C ++V 
Sbjct: 409 ILVNSLVV-----KHAEKIPPSPPPVIEDPAFGINTIQNSNLNDGSNGWFPLGSCTLSV- 462

Query: 159 DSMGDGKILPSSGK-----------FFASATERTQNWNGIQQEITGRVQRKLVYEVAAVV 13
            + G  +ILP   +            +   T RTQ W G  Q IT RV+  L Y+V+A V
Sbjct: 463 -ATGSPRILPPMARDSLGAHNPLSGHYILVTNRTQTWMGPAQMITDRVKLYLTYQVSAWV 521

Query: 12  RI 7
           RI
Sbjct: 522 RI 523


>ref|XP_004167717.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 910

 Score =  244 bits (622), Expect = 7e-63
 Identities = 121/173 (69%), Positives = 142/173 (82%)
 Frame = -2

Query: 519 AGSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEG 340
           +GSLQG+ +VLATLKL YK S+TN+L +GR SVLK++WEKLEGTF+L T+PDRVVFYLEG
Sbjct: 107 SGSLQGSVDVLATLKLVYKDSTTNYLCIGRTSVLKEKWEKLEGTFSLSTMPDRVVFYLEG 166

Query: 339 PSPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRGCKIAVH 160
           PSPG+DLLI           E ET  G  +  GDENI LNP+F+D L NWSGRGCKIA+H
Sbjct: 167 PSPGIDLLIQSVEITCACPNELET--GIANA-GDENISLNPRFDDDLKNWSGRGCKIALH 223

Query: 159 DSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRIFG 1
           DSMG+GK+LP SGKFFASA ER Q+WNGIQQEITGRVQRK+ Y+VAAVVR+FG
Sbjct: 224 DSMGNGKVLPQSGKFFASAMERLQSWNGIQQEITGRVQRKVAYDVAAVVRVFG 276



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
 Frame = -2

Query: 501 AAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEGPSPGVD 322
           + +V ATL ++   S   ++ +        +W +L+G F L   P +VV Y+EGP  GVD
Sbjct: 281 STDVRATLWVQTPNSREQYIGIANVQATDKDWVQLQGKFLLNASPSKVVIYIEGPPSGVD 340

Query: 321 LLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRG-CKIAV------ 163
           +LID           S       +     NII+N    +G   W   G C ++V      
Sbjct: 341 ILIDSFVVKQAQKISSSPPPRAENLAYGFNIIMNNNLSNGTKGWFPLGSCTLSVGTGSPH 400

Query: 162 ------HDSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRI 7
                  D +G  +  P SG++   AT RT+ W G  Q IT +V+    Y+V+A V+I
Sbjct: 401 IVPPMARDPLGPSQ--PLSGRYIL-ATNRTETWMGPAQMITDKVKPFHTYQVSAWVKI 455


>ref|XP_004141418.1| PREDICTED: endo-1,4-beta-xylanase A-like [Cucumis sativus]
          Length = 910

 Score =  244 bits (622), Expect = 7e-63
 Identities = 121/173 (69%), Positives = 142/173 (82%)
 Frame = -2

Query: 519 AGSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEG 340
           +GSLQG+ +VLATLKL YK S+TN+L +GR SVLK++WEKLEGTF+L T+PDRVVFYLEG
Sbjct: 107 SGSLQGSVDVLATLKLVYKDSTTNYLCIGRTSVLKEKWEKLEGTFSLSTMPDRVVFYLEG 166

Query: 339 PSPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRGCKIAVH 160
           PSPG+DLLI           E ET  G  +  GDENI LNP+F+D L NWSGRGCKIA+H
Sbjct: 167 PSPGIDLLIQSVEITCACPNELET--GIANA-GDENISLNPRFDDDLKNWSGRGCKIALH 223

Query: 159 DSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRIFG 1
           DSMG+GK+LP SGKFFASA ER Q+WNGIQQEITGRVQRK+ Y+VAAVVR+FG
Sbjct: 224 DSMGNGKVLPQSGKFFASAMERLQSWNGIQQEITGRVQRKVAYDVAAVVRVFG 276



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
 Frame = -2

Query: 501 AAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEGPSPGVD 322
           + +V ATL ++   S   ++ +        +W +L+G F L   P +VV Y+EGP  GVD
Sbjct: 281 STDVRATLWVQTPNSREQYIGIANVQATDKDWVQLQGKFLLNASPSKVVIYIEGPPSGVD 340

Query: 321 LLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRG-CKIAV------ 163
           +LID           S       +     NII+N    +G   W   G C ++V      
Sbjct: 341 ILIDSFVVKQAQKISSSPPPRAENLAYGFNIIMNNNLSNGTKGWFPLGSCTLSVGTGSPH 400

Query: 162 ------HDSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRI 7
                  D +G  +  P SG++   AT RT+ W G  Q IT +V+    Y+V+A V+I
Sbjct: 401 IVPPMARDPLGPSQ--PLSGRYIL-ATNRTETWMGPAQMITDKVKPFHTYQVSAWVKI 455


>ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max]
          Length = 930

 Score =  243 bits (621), Expect = 9e-63
 Identities = 119/173 (68%), Positives = 140/173 (80%)
 Frame = -2

Query: 519 AGSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEG 340
           +G  Q +++V+ATLKLEY  S+T +LF+GR SV KD WEKLEGTF+L T+P RV+FYLEG
Sbjct: 122 SGLSQRSSDVIATLKLEYHDSATRYLFIGRTSVNKDSWEKLEGTFSLSTMPHRVIFYLEG 181

Query: 339 PSPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRGCKIAVH 160
           P+PGVDLLI        +   S T  G C + GD+NII+NPQF+DGLNNWSGRGCKI +H
Sbjct: 182 PAPGVDLLIRSVEINCSTPNNSTTSTG-CVSAGDDNIIINPQFDDGLNNWSGRGCKIMLH 240

Query: 159 DSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAVVRIFG 1
           DSM DGKI+P SGKFFASATERTQ+WNGIQQEITGRVQRKL YEV A+VRIFG
Sbjct: 241 DSMNDGKIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFG 293



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
 Frame = -2

Query: 516 GSLQGAAEVLATLKLEYKYSSTNFLFVGRKSVLKDEWEKLEGTFTLETLPDRVVFYLEGP 337
           G+    A+V ATL ++       ++ + +      +W  ++G F L   P +VV YLEGP
Sbjct: 293 GNNVSTADVRATLWVQTPDLREQYIGIAKVQATDKDWVTMQGKFLLNGSPSKVVLYLEGP 352

Query: 336 SPGVDLLIDXXXXXXXSNKESETVNGTCHTDGDENIILNPQFEDGLNNWSGRG-CKIAV- 163
            PG D+L++       +     T     +     NII N    D  N W   G C ++V 
Sbjct: 353 PPGTDILLNNLILKHAAKTPPSTPPDLKNIAFGVNIIENSNLADSTNGWFPLGNCTLSVK 412

Query: 162 -----------HDSMGDGKILPSSGKFFASATERTQNWNGIQQEITGRVQRKLVYEVAAV 16
                       DS+G  + L  SG++    T RTQ W G  Q IT +V+  + Y+V+A 
Sbjct: 413 TGSPHIIPPMARDSLGSHEFL--SGRYIL-VTNRTQTWMGPAQTITDKVKLFVTYQVSAW 469

Query: 15  VRI 7
           VRI
Sbjct: 470 VRI 472


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