BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030071
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   232   2e-59
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]                       228   3e-58
ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, p...   225   3e-57
ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [C...   225   3e-57
gb|ACN40078.1| unknown [Picea sitchensis]                             225   3e-57

>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/140 (80%), Positives = 125/140 (89%)
 Frame = -3

Query: 504 AHVDVKTTDNFTLRMFCIGFTRRRPNQVKRTSYAQTSQIKQIRQKMREIMNKHAASCDLK 325
           AHVDVKTTDN+TLRMFCIGFT+RRPNQVKRT YAQTSQI+QIR+KMREIM   AASCDLK
Sbjct: 123 AHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQAASCDLK 182

Query: 324 ELVQKFIPGIIGKDIENATRGIYPLQNIFIRKVKILKAPKFDLGKLMELHGDYSTEDVGI 145
           +LVQKFIP +IGK+IE AT  IYPLQN+FIRKVKILKAPKFDLGKLME+HGDY  EDVG+
Sbjct: 183 DLVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYK-EDVGV 241

Query: 144 KVDRPTEDAPMEASTEVVGA 85
           K+DRP +D PME   EVVGA
Sbjct: 242 KIDRPADDVPMEGEPEVVGA 261


>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
          Length = 261

 Score =  228 bits (582), Expect = 3e-58
 Identities = 110/140 (78%), Positives = 124/140 (88%)
 Frame = -3

Query: 504 AHVDVKTTDNFTLRMFCIGFTRRRPNQVKRTSYAQTSQIKQIRQKMREIMNKHAASCDLK 325
           AH+DVKTTDN+TLR+FCIGFT+RRPNQVKRT YAQTSQI+QIR+KMREIM   A+SCDLK
Sbjct: 123 AHIDVKTTDNYTLRLFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMTNQASSCDLK 182

Query: 324 ELVQKFIPGIIGKDIENATRGIYPLQNIFIRKVKILKAPKFDLGKLMELHGDYSTEDVGI 145
           ELVQKFIP +IGK+IE AT  IYPLQN+FIRKVKILKAPKFDLGKLME+HGDY  ED G+
Sbjct: 183 ELVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYK-EDFGV 241

Query: 144 KVDRPTEDAPMEASTEVVGA 85
           K+DRP ED P+E   EVVGA
Sbjct: 242 KLDRPGEDVPVEGEAEVVGA 261


>ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cucumis
           sativus]
          Length = 208

 Score =  225 bits (574), Expect = 3e-57
 Identities = 114/140 (81%), Positives = 126/140 (90%)
 Frame = -3

Query: 504 AHVDVKTTDNFTLRMFCIGFTRRRPNQVKRTSYAQTSQIKQIRQKMREIMNKHAASCDLK 325
           AHVDVKTTDN+TLRMFCIGFT+RRPNQVKRT YAQ+SQI+QIR+KMREIM   A SCDLK
Sbjct: 71  AHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLK 130

Query: 324 ELVQKFIPGIIGKDIENATRGIYPLQNIFIRKVKILKAPKFDLGKLMELHGDYSTEDVGI 145
           ELV+KFIP  IGKDIE AT  IYPLQN+FIRKVKILKAPKFDLGKLME+HGDYS EDVG+
Sbjct: 131 ELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGV 189

Query: 144 KVDRPTEDAPMEASTEVVGA 85
           KVDRP E+A +E +TEVVGA
Sbjct: 190 KVDRPAEEA-VEGATEVVGA 208


>ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
           gi|449472057|ref|XP_004153483.1| PREDICTED: 40S
           ribosomal protein S3a-like [Cucumis sativus]
          Length = 260

 Score =  225 bits (574), Expect = 3e-57
 Identities = 114/140 (81%), Positives = 126/140 (90%)
 Frame = -3

Query: 504 AHVDVKTTDNFTLRMFCIGFTRRRPNQVKRTSYAQTSQIKQIRQKMREIMNKHAASCDLK 325
           AHVDVKTTDN+TLRMFCIGFT+RRPNQVKRT YAQ+SQI+QIR+KMREIM   A SCDLK
Sbjct: 123 AHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLK 182

Query: 324 ELVQKFIPGIIGKDIENATRGIYPLQNIFIRKVKILKAPKFDLGKLMELHGDYSTEDVGI 145
           ELV+KFIP  IGKDIE AT  IYPLQN+FIRKVKILKAPKFDLGKLME+HGDYS EDVG+
Sbjct: 183 ELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGV 241

Query: 144 KVDRPTEDAPMEASTEVVGA 85
           KVDRP E+A +E +TEVVGA
Sbjct: 242 KVDRPAEEA-VEGATEVVGA 260


>gb|ACN40078.1| unknown [Picea sitchensis]
          Length = 260

 Score =  225 bits (574), Expect = 3e-57
 Identities = 111/140 (79%), Positives = 126/140 (90%)
 Frame = -3

Query: 504 AHVDVKTTDNFTLRMFCIGFTRRRPNQVKRTSYAQTSQIKQIRQKMREIMNKHAASCDLK 325
           AHVDVKTTD++TLRMFCIGFT+RRPNQVKRT YAQ+SQI+QIR+KM EIM + A+SCDLK
Sbjct: 122 AHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMTEIMIREASSCDLK 181

Query: 324 ELVQKFIPGIIGKDIENATRGIYPLQNIFIRKVKILKAPKFDLGKLMELHGDYSTEDVGI 145
           ELV KFIP +IGK+IE AT  IYPLQN+FIRKVKILKAPKFDLGKLME+HGDYS EDVG+
Sbjct: 182 ELVAKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGV 240

Query: 144 KVDRPTEDAPMEASTEVVGA 85
           KVDR TE+AP EA  E+VGA
Sbjct: 241 KVDRTTEEAPAEAEAELVGA 260