BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030067
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    66   3e-09
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...    65   8e-09
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    59   4e-07
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    57   2e-06
ref|XP_003602302.1| F-box family protein [Medicago truncatula] g...    56   3e-06

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +1

Query: 1   SFSISALKFLPGHKGNAILFTDDNFYDDNHADQA--LHHDIGVFNLEDSSFGKLKDYPSF 174
           +FS SA + L G KGN I F D+ FY     D    +  DIGVF LE    G L+++P +
Sbjct: 321 TFSASASE-LSGCKGNCIFFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDY 379

Query: 175 STLFWPPLNWIAAS 216
           S +FWPP +WIA++
Sbjct: 380 SKMFWPPPDWIAST 393


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +1

Query: 1   SFSISALKFLPGHKGNAILFTDDNFYDDNHADQA--LHHDIGVFNLEDSSFGKLKDYPSF 174
           +FS SA + L G KGN I F DD FY     D       DIGVF LE    G L+++P  
Sbjct: 321 TFSASASE-LSGCKGNCIFFNDDFFYSRGEGDDGSLFGRDIGVFELESGCIGPLRNFPDN 379

Query: 175 STLFWPPLNWIAAS 216
           S +FWPP +W+A++
Sbjct: 380 SKMFWPPPDWVAST 393


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/69 (40%), Positives = 42/69 (60%)
 Frame = +1

Query: 1   SFSISALKFLPGHKGNAILFTDDNFYDDNHADQALHHDIGVFNLEDSSFGKLKDYPSFST 180
           +FS+S+  F PG KGN + FT D F +++  D     D G+F+LE+   G L  +P +S 
Sbjct: 335 TFSLSSTDF-PGFKGNCVYFTQDCFCEED--DDRPGFDAGIFDLEERIAGPLSAFPGYSK 391

Query: 181 LFWPPLNWI 207
           +FWPP  W+
Sbjct: 392 IFWPPPAWL 400


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   SFSISALKFLPGHKGNAILFTDDNFYDDNHADQALHHD-IGVFNLEDSSFGKLKDYPSFS 177
           SFS  A  F  G KGN+I FT+ +F+ D   D A     IGVF+L+  S G L  Y ++S
Sbjct: 312 SFSARASDFY-GCKGNSICFTNISFFSDAEEDDASRSGTIGVFDLDSGSIGPLSSYANYS 370

Query: 178 TLFWPPLNWIAAS 216
              WPP  W++++
Sbjct: 371 KTIWPPPAWVSST 383


>ref|XP_003602302.1| F-box family protein [Medicago truncatula]
           gi|355491350|gb|AES72553.1| F-box family protein
           [Medicago truncatula]
          Length = 434

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/78 (44%), Positives = 43/78 (55%)
 Frame = +1

Query: 1   SFSISALKFLPGHKGNAILFTDDNFYDDNHADQALHHDIGVFNLEDSSFGKLKDYPSFST 180
           SFS SA   L   KGN ++F+DD FYD    DQ L   + VF+L+      L DYP +ST
Sbjct: 335 SFSASASD-LSVVKGNCVIFSDDAFYD---FDQMLC-GMCVFHLDQCWVSPLSDYPEYST 389

Query: 181 LFWPPLNWIAASPCTRKV 234
            FWPP  WI  S    K+
Sbjct: 390 SFWPPPEWIVKSCIHEKI 407