BLASTX nr result

ID: Coptis21_contig00030058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030058
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...    65   6e-09
ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...    63   2e-08
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]    63   2e-08
gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [...    62   6e-08

>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
           gi|223540603|gb|EEF42166.1| homeobox protein, putative
           [Ricinus communis]
          Length = 296

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +3

Query: 126 MTCNEMDFFPTTFMLQTHHEQNQ-QPPTSLNPILPLCTSQDF 248
           MTCN M FFP  FMLQT HE++  QPPTSLNPILP CT+ DF
Sbjct: 1   MTCNGMAFFPANFMLQTPHEEDHHQPPTSLNPILPSCTTHDF 42


>ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|222851417|gb|EEE88964.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +3

Query: 126 MTCNEMDFFPTTFMLQTHHEQ-NQQPPTSLNPILPLCTSQDF 248
           MTCN M FFPT FMLQ+ H+Q + QPPTSLNPILP C  +DF
Sbjct: 1   MTCNGMAFFPTNFMLQSSHDQDDHQPPTSLNPILPSCAPRDF 42


>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = +3

Query: 126 MTCNEMDFFPTTFMLQTHHEQNQQPPTSLNPILPLCTSQDF 248
           MTCN M FFP  FMLQT  E + QPP SLNPILP C  QDF
Sbjct: 1   MTCNGMAFFPANFMLQTPREDDHQPPNSLNPILPSCAPQDF 41


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = +3

Query: 126 MTCNEMDFFPTTFMLQTHHEQNQQPPTSLNPILPLCTSQDF 248
           MTCN M FFP  FMLQT  E + QPP SLNPILP C  QDF
Sbjct: 1   MTCNGMAFFPANFMLQTPREDDHQPPNSLNPILPSCAPQDF 41


>gb|AAT39949.1| Homeobox-leucine zipper protein HAT7 , putative [Solanum demissum]
          Length = 171

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/44 (70%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
 Frame = +3

Query: 126 MTCN--EMDFFPTTFMLQT-HHEQNQQPPTSLNPILPLCTSQDF 248
           MTC   EM FFPT FMLQT HHE   QP TSLNPILP C+ QDF
Sbjct: 1   MTCTNYEMAFFPTNFMLQTPHHEDEHQPSTSLNPILPSCSPQDF 44


Top