BLASTX nr result

ID: Coptis21_contig00030045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030045
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527481.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002527481.1| conserved hypothetical protein [Ricinus communis]
           gi|223533121|gb|EEF34879.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = -2

Query: 232 VCGFGFDADRREFKMVLVSFYKLNDG--EDVQSEVHVYTLGSDTWRKLIVSVPHLVFKAE 59
           V GFGFD    E+K+V V +    +G   D++ +V VY LG + WR +IVS       +E
Sbjct: 3   VLGFGFDPKSSEYKVVRVVYRMRENGCKVDIRPQVEVYELGMNAWRSIIVSAAPQYVISE 62

Query: 58  VAVSFEFANGSLHWI 14
           +++   F NG++HWI
Sbjct: 63  LSLQV-FLNGAVHWI 76


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