BLASTX nr result

ID: Coptis21_contig00030039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030039
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29284.3| unnamed protein product [Vitis vinifera]               94   1e-17
emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]    87   1e-15
ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
gb|ABK25914.1| unknown [Picea sitchensis]                              64   2e-08
ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496...    62   4e-08

>emb|CBI29284.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = +3

Query: 126 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 305
           M  L+ TVQVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTA
Sbjct: 1   MGTLNLTVQVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTA 60

Query: 306 LLLN 317
           LLLN
Sbjct: 61  LLLN 64


>emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]
          Length = 212

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = +3

Query: 150 QVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 317
           QVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTALLLN
Sbjct: 28  QVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTALLLN 83


>ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +3

Query: 126 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 305
           MA  D T+QVL+LSP VT  +LN+FF YCGTVEKI L++ +DQ Q A VTF QP+A QTA
Sbjct: 1   MAQSDLTIQVLNLSPSVTRAELNTFFSYCGTVEKIELQKDKDQMQSALVTFTQPYAFQTA 60

Query: 306 LLLN 317
           LLL+
Sbjct: 61  LLLS 64


>gb|ABK25914.1| unknown [Picea sitchensis]
          Length = 215

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = +3

Query: 138 DQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLL 314
           D TVQV +LS K T+ D+  FF Y GT++K  LER     Q+A+VTF++P+A +TA+LL
Sbjct: 3   DYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLL 61


>ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496192|gb|AES77395.1|
           Protein vip1 [Medicago truncatula]
           gi|388503878|gb|AFK40005.1| unknown [Medicago
           truncatula]
          Length = 255

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/58 (46%), Positives = 40/58 (68%)
 Frame = +3

Query: 144 TVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 317
           T ++ +L+P+ T  D+ +FF YCG +E++ + R  D    AYVTFR  +AL+TALLLN
Sbjct: 7   TAEITNLTPRATENDVQNFFGYCGVIERVDVIRSSDYESTAYVTFRDAYALETALLLN 64


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