BLASTX nr result
ID: Coptis21_contig00030039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00030039 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29284.3| unnamed protein product [Vitis vinifera] 94 1e-17 emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] 87 1e-15 ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2... 82 4e-14 gb|ABK25914.1| unknown [Picea sitchensis] 64 2e-08 ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496... 62 4e-08 >emb|CBI29284.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 94.0 bits (232), Expect = 1e-17 Identities = 46/64 (71%), Positives = 53/64 (82%) Frame = +3 Query: 126 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 305 M L+ TVQVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTA Sbjct: 1 MGTLNLTVQVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTA 60 Query: 306 LLLN 317 LLLN Sbjct: 61 LLLN 64 >emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] Length = 212 Score = 87.4 bits (215), Expect = 1e-15 Identities = 42/56 (75%), Positives = 48/56 (85%) Frame = +3 Query: 150 QVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 317 QVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTALLLN Sbjct: 28 QVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTALLLN 83 >ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1| predicted protein [Populus trichocarpa] Length = 187 Score = 82.4 bits (202), Expect = 4e-14 Identities = 41/64 (64%), Positives = 50/64 (78%) Frame = +3 Query: 126 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 305 MA D T+QVL+LSP VT +LN+FF YCGTVEKI L++ +DQ Q A VTF QP+A QTA Sbjct: 1 MAQSDLTIQVLNLSPSVTRAELNTFFSYCGTVEKIELQKDKDQMQSALVTFTQPYAFQTA 60 Query: 306 LLLN 317 LLL+ Sbjct: 61 LLLS 64 >gb|ABK25914.1| unknown [Picea sitchensis] Length = 215 Score = 63.5 bits (153), Expect = 2e-08 Identities = 30/59 (50%), Positives = 42/59 (71%) Frame = +3 Query: 138 DQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLL 314 D TVQV +LS K T+ D+ FF Y GT++K LER Q+A+VTF++P+A +TA+LL Sbjct: 3 DYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLL 61 >ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496192|gb|AES77395.1| Protein vip1 [Medicago truncatula] gi|388503878|gb|AFK40005.1| unknown [Medicago truncatula] Length = 255 Score = 62.4 bits (150), Expect = 4e-08 Identities = 27/58 (46%), Positives = 40/58 (68%) Frame = +3 Query: 144 TVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 317 T ++ +L+P+ T D+ +FF YCG +E++ + R D AYVTFR +AL+TALLLN Sbjct: 7 TAEITNLTPRATENDVQNFFGYCGVIERVDVIRSSDYESTAYVTFRDAYALETALLLN 64