BLASTX nr result

ID: Coptis21_contig00030030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030030
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB70124.1| homogentisate phytyltransferase VTE2-1 [Allium am...    93   2e-17
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...    93   3e-17
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...    92   4e-17
emb|CBI21093.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>gb|ABB70124.1| homogentisate phytyltransferase VTE2-1 [Allium ampeloprasum]
          Length = 395

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/136 (36%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
 Frame = +2

Query: 2   FNARNSSTATIENYIVS-EHRSSDKSRNHSTTIIGHETATE-------LDNDQPEPLLSS 157
           ++ RN +   I+  +V+ EH     +    +  +GH  AT         +   P  +  +
Sbjct: 35  YSCRNYNPIRIQRCLVNYEHVKPRFTTCSRSQKLGHVKATSEHSLESGSEGYTPRSIWEA 94

Query: 158 IIAKFELLRKFSRPYAILGTALGVASCSLIPLETISEISPRFFVGVLQAALPMMLIHLFT 337
           ++A   +L KFSRP+ I+GTA+G+ S SL+ +E++S+ISP FFVG+L+A +  + ++++ 
Sbjct: 95  VLASLNVLYKFSRPHTIIGTAMGIMSVSLLVVESLSDISPLFFVGLLEAVVAALFMNVYI 154

Query: 338 NGINQLFDVEMDKVNK 385
            G+NQLFD+E+DKVNK
Sbjct: 155 VGLNQLFDIEIDKVNK 170


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/94 (45%), Positives = 64/94 (68%)
 Frame = +2

Query: 104 HETATELDNDQPEPLLSSIIAKFELLRKFSRPYAILGTALGVASCSLIPLETISEISPRF 283
           HE   E  +DQ   L   +  K +   +FSRP+ I+GT +G+ S SL+PL +I ++SP F
Sbjct: 83  HEFVIESKDDQLTLLQGDLWRKIDAFYRFSRPHTIIGTIIGITSVSLLPLTSIGDLSPAF 142

Query: 284 FVGVLQAALPMMLIHLFTNGINQLFDVEMDKVNK 385
           FVG L+A +P + ++++  G+NQLFDVE+DKVNK
Sbjct: 143 FVGYLKALIPSIFMNIYVVGLNQLFDVEIDKVNK 176


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/123 (39%), Positives = 79/123 (64%)
 Frame = +2

Query: 17  SSTATIENYIVSEHRSSDKSRNHSTTIIGHETATELDNDQPEPLLSSIIAKFELLRKFSR 196
           SS+  I++     H+   ++  H ++  G+ +  E  N   + L +  +        FSR
Sbjct: 61  SSSVNIQHLTFKSHK---RNPIHVSSEYGYPSKPEDQNHVSKQLRAFYL--------FSR 109

Query: 197 PYAILGTALGVASCSLIPLETISEISPRFFVGVLQAALPMMLIHLFTNGINQLFDVEMDK 376
           P+ I+GT +G+ S SL+PLETIS++SP FFVG+L+A +P +L++++  G+NQ+FDVE+DK
Sbjct: 110 PHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYVVGLNQIFDVEIDK 169

Query: 377 VNK 385
           VNK
Sbjct: 170 VNK 172


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/123 (39%), Positives = 79/123 (64%)
 Frame = +2

Query: 17  SSTATIENYIVSEHRSSDKSRNHSTTIIGHETATELDNDQPEPLLSSIIAKFELLRKFSR 196
           SS+  I++     H+   ++  H ++  G+ +  E  N   + L +  +        FSR
Sbjct: 37  SSSVNIQHLTFKSHK---RNPIHVSSEYGYPSKPEDQNHVSKQLRAFYL--------FSR 85

Query: 197 PYAILGTALGVASCSLIPLETISEISPRFFVGVLQAALPMMLIHLFTNGINQLFDVEMDK 376
           P+ I+GT +G+ S SL+PLETIS++SP FFVG+L+A +P +L++++  G+NQ+FDVE+DK
Sbjct: 86  PHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYVVGLNQIFDVEIDK 145

Query: 377 VNK 385
           VNK
Sbjct: 146 VNK 148


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/67 (56%), Positives = 58/67 (86%)
 Frame = +2

Query: 185 KFSRPYAILGTALGVASCSLIPLETISEISPRFFVGVLQAALPMMLIHLFTNGINQLFDV 364
           +FSRP+ ++GT +G+ S SL+P+ETISE+SP FF+G+L+A +P +L++++  G+NQLFDV
Sbjct: 6   QFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLNQLFDV 65

Query: 365 EMDKVNK 385
           E+DKVNK
Sbjct: 66  EIDKVNK 72


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