BLASTX nr result

ID: Coptis21_contig00030023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030023
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805...    90   2e-16
ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818...    89   5e-16
ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago ...    87   2e-15
ref|XP_002327660.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
gb|AFK46137.1| unknown [Lotus japonicus]                               85   7e-15

>ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805416 [Glycine max]
          Length = 346

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
 Frame = -3

Query: 439 LVDELCEGISKIFLQKKTLPDFEGKHTRFVYNSDGEL-KGEVVVN---SVASPSVLRLKG 272
           L+DELCEG++ I + ++  P FEGKHTRFVYNSD E+ K EV  N   S +S  +LRLKG
Sbjct: 266 LLDELCEGLNNISMNERIAPKFEGKHTRFVYNSDDEIVKEEVEENFGESASSTKILRLKG 325

Query: 271 MPVPEGKHLRFPEEEE 224
           +P P+GKHLRF EEE+
Sbjct: 326 LPTPKGKHLRFYEEED 341


>ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818852 [Glycine max]
          Length = 343

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
 Frame = -3

Query: 439 LVDELCEGISKIFLQKKTLPDFEGKHTRFVYNSDGEL-KGEVVVN---SVASPSVLRLKG 272
           L+DELCEG++ I + ++  P FEGKHTRF YNSD E+ K EV  N   S +S ++LRLKG
Sbjct: 263 LLDELCEGLNNISMNERIAPKFEGKHTRFAYNSDDEIVKEEVEENFGESDSSSNILRLKG 322

Query: 271 MPVPEGKHLRFPEEEE 224
           +P P+GKHLRF EEEE
Sbjct: 323 LPTPKGKHLRFYEEEE 338


>ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago truncatula]
           gi|355513500|gb|AES95123.1| hypothetical protein
           MTR_5g022010 [Medicago truncatula]
          Length = 289

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = -3

Query: 436 VDELCEGISKIFLQKKTLPDFEGKHTRFVYNSDGELKGEVVVNS--VASPSVLRLKGMPV 263
           +DELCEG++ I + +K +P F GKHTRFVYNSD EL  E    S    S +VL LKG+P 
Sbjct: 211 LDELCEGLNNIRVNEKVVPKFAGKHTRFVYNSDDELVSEEEDESGNADSHNVLHLKGLPT 270

Query: 262 PEGKHLRFPEEEE*GSN 212
           P+GKHLRF EEEE G +
Sbjct: 271 PKGKHLRFSEEEEEGKS 287


>ref|XP_002327660.1| predicted protein [Populus trichocarpa] gi|222836745|gb|EEE75138.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/72 (59%), Positives = 53/72 (73%)
 Frame = -3

Query: 439 LVDELCEGISKIFLQKKTLPDFEGKHTRFVYNSDGELKGEVVVNSVASPSVLRLKGMPVP 260
           L+DELCEGIS+I +++K +  FEGKHTRFVYNSD E+  EVV         LRLKG+P P
Sbjct: 302 LLDELCEGISQISVKEKAMAKFEGKHTRFVYNSDDEIVEEVV---DCGDDDLRLKGLPTP 358

Query: 259 EGKHLRFPEEEE 224
           +GKH+RF  EEE
Sbjct: 359 KGKHIRFHTEEE 370


>gb|AFK46137.1| unknown [Lotus japonicus]
          Length = 335

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
 Frame = -3

Query: 439 LVDELCEGISKIFLQKKTLPDFEGKHTRFVYNSDGELKGEVVV---NSVASPSVLRLKGM 269
           ++DELC G++ I + ++ +P F GKHTRFVYNSD EL  EV V    S +S +VL L G+
Sbjct: 258 VLDELCAGLNNISVNERAVPKFSGKHTRFVYNSDEELVEEVEVVMSESDSSDNVLHLMGL 317

Query: 268 PVPEGKHLRFPEEEE 224
           P P+GKHLRF EEEE
Sbjct: 318 PTPKGKHLRFSEEEE 332


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