BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030017
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]   114   8e-24
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...   109   2e-22
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
emb|CBI28813.3| unnamed protein product [Vitis vinifera]               79   4e-13

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SMTHPKQVHAQLITTSRIRDNYAASRILNFTALSPSGDLDYALKLFKNTQEPNSFMWNTI 182
           SM   KQ+HAQ+I ++RI DNYAASR+L+F ALS SGDL YAL+LF NTQEPNSFMWNT+
Sbjct: 38  SMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMWNTL 97

Query: 183 IRALANSPNPSQAISIYKKMR 245
           IRA A+S NPS+A+ +Y  MR
Sbjct: 98  IRAHASSLNPSEALLLYVDMR 118


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SMTHPKQVHAQLITTSRIRDNYAASRILNFTALSPSGDLDYALKLFKNTQEPNSFMWNTI 182
           SM   KQ+HAQ+I ++RI DNYAASR+L+F ALS SGDL YAL+LF NTQEPNSFMWNT+
Sbjct: 40  SMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMWNTL 99

Query: 183 IRALANSPNPSQAISIYKKMR 245
           IRA A+S NPS+A+ +Y  MR
Sbjct: 100 IRAHASSLNPSEALLLYVDMR 120


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/80 (66%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   SMTHPKQVHAQLITTSRIRDNYAASRILNFTALSPSGDLDYALKLFKNTQEPNSFMWNTI 182
           SMT  KQ+HAQ+I TSRI D++AASR+L+F ALS S D++YA+KLFK+ Q+PN FMWNTI
Sbjct: 61  SMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNIFMWNTI 120

Query: 183 IRALANSPNPSQAISIYKKM 242
           IRALANS NP QA+  Y +M
Sbjct: 121 IRALANSSNPDQALFFYIQM 140


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = +3

Query: 3   SMTHPKQVHAQLITTSRIRDNYAASRILNFTALSPSGDLDYALKLFKNTQEPNSFMWNTI 182
           S +  KQ+ AQ+I T  I D +A+SR+++F A+S S +LDY +K+  N Q PN F WN +
Sbjct: 65  SFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAV 124

Query: 183 IRALANSPNPSQAISIYKKM 242
           IR    S NP + + +YK+M
Sbjct: 125 IRGCVESENPQKGLVLYKRM 144


>emb|CBI28813.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = +3

Query: 21  QVHAQLITTSRIRDNYAASRILNFTALSPSGDLDYALKLFKNTQEPNSFMWNTIIRALAN 200
           Q+HAQ ITT    DN+ ASRIL+F ALSP G + YA  LF   ++P+ F+ NT+IRA A 
Sbjct: 89  QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 148

Query: 201 SPNPSQAISIYKKM 242
           SPNP  A+  Y +M
Sbjct: 149 SPNPIDAVVFYSEM 162