BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00030009
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    79   5e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    78   9e-13
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    77   2e-12
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    75   4e-12

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = +2

Query: 56  YYTHGFRVFKLDPIGLKWVRLKSLCGRMLFLGDNGSFSVSASDFPQCKPDHIYVTDDYHI 235
           Y T  F VFKLD  G +W R+ SL   MLF+G+N S ++SAS    C  D IY TDDY  
Sbjct: 285 YKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSA 344

Query: 236 GYWDIEIIKKKGVGPHDMGVFNLEDESFE--PHYPMES-DDIIMPRPIWI 376
             +D  I      G HD+G+F L D S E  P YP  S   +  P P+WI
Sbjct: 345 NNYDGHI------GEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWI 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +2

Query: 56  YYTHGFRVFKLDPIGLKWVRLKSLCGRMLFLGDNGSFSVSASDFPQCKPDHIYVTDDYHI 235
           Y T  F+V +LD    +W  + SL  R LFLG+N S S+S+ DFP CK + IY TDDY  
Sbjct: 285 YRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 236 GYWDIEIIKKKGV-GPHDMGVFNLEDESFEPHYPMESDDIIMPRPIWI 376
             +D       G+ G  D+G+FNLED S EP  P     I  P P+W+
Sbjct: 345 DNYD-------GIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWPPPLWV 384


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +2

Query: 56  YYTHGFRVFKLDPIGLKWVRLKSLCGRMLFLGDNGSFSVSASDFPQCKPDHIYVTDDYHI 235
           Y T  F+V +LD    +W  + SL  R LFLG+N S S+S+ DFP CK + IY TDDY  
Sbjct: 285 YRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 236 GYWDIEIIKKKGV-GPHDMGVFNLEDESFEPHYPMESDDIIMPRPIWI 376
             +D       G+ G  D+G+FNLED S EP  P     I  P P+W+
Sbjct: 345 DNYD-------GIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWPPPLWV 384


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
 Frame = +2

Query: 56  YYTHGFRVFKLDPIGLKWVRLKSLCGRMLFLGDNGSFSVSASDFPQCKPDHIYVTDDYHI 235
           Y T GF VFK++   L W R+++L  R+LF+G N S S  ASDF  C  D IY TDDY  
Sbjct: 285 YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYS- 343

Query: 236 GYWDIEIIKKKGVGPHDMGVFNLEDESFEPHYPMESDD---IIMPRPIWI 376
                E       G HD+GVF L D+S EP      +    +  P PIW+
Sbjct: 344 -----ESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWV 388


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
 Frame = +2

Query: 56  YYTHGFRVFKLDPIGLKWVRLKSLCGRMLFLGDNGSFSVSASDFPQCKPDHIYVTDDYHI 235
           Y T  F VF+LD  G +W+R+ +L  + LF+G+N S S+SA+DF  C  + IY TDDY  
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLD 349

Query: 236 GYWDIEIIKKKGVGPHDMGVFNLEDESFE--PHYPME-SDDIIMPRPIWI 376
             +D         G HD+G+F L DE+ E  P YP   +  +    P+W+
Sbjct: 350 ANYDGHF------GDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWV 393