BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029950
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   320   5e-85
emb|CBI19029.3| unnamed protein product [Vitis vinifera]              303   7e-80
ref|XP_003589591.1| Replication factor C large subunit [Medicago...   256   7e-66
ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837...   239   1e-60
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   236   6e-60

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  320 bits (819), Expect = 5e-85
 Identities = 174/366 (47%), Positives = 233/366 (63%)
 Frame = +1

Query: 7    CSSGMYSKSPTFAFVDGIMSHHLPTKASEHGHENSLWTSKYQPTKASEVCGNYESVRRVN 186
            C   + +  P+    + +M ++L      +  E+SLW +KYQP KA EVCGN ESV+ ++
Sbjct: 229  CGRNIDAMPPSRLLQESMMPYYL---GCGNQPEDSLWINKYQPEKAIEVCGNGESVKLLS 285

Query: 187  EWLGSWRERYSRNPKMLSRENTFVTXXXXXXXXXXXXXXXMGERADLKNVLLVSGPVGSG 366
            EWL  W E+ S++ K  +  +  +                + E   LKNVLLV+GPVGSG
Sbjct: 286  EWLHLWHEKDSQSSKKATGGDKCIMQDSDNSFYGSDSDSDLDEGTGLKNVLLVTGPVGSG 345

Query: 367  KSAAIYACAREQGFEVIEVSASDWRNGAQMKLKFGAAMESLGLNKWSLEVPLGLNVKHIP 546
            KSAAIYACA+EQGF +IE++ S  R+G  +K + G A+ES GL + SLE P+G   KHI 
Sbjct: 346  KSAAIYACAKEQGFRIIEINTSGLRSGTVVKQRIGEALESHGLKR-SLENPIGSQSKHIM 404

Query: 547  EFPSTQPCKSSIQESDDDVIEVLPETCKDKSDSLKSGPCNVGVKDNSTASHRGADKTLIL 726
            +     P  ++ QE +  VIE++P + ++ S      P     K N TA  RG   TLIL
Sbjct: 405  KSFPALPNGTATQEFESKVIELIPSSDEEDSHDAIGTPEKHIHKKNRTACDRGETITLIL 464

Query: 727  FEDVDTVFDEDRGLIASIQQIAETAKRPIILTSSSKDPLLPDQLDRVEVRFAIPLPEELS 906
            FEDVD  F EDRGLIA+IQQ+AETAKRPIILTS+S +P+LPD LDR+EV F +P P+EL 
Sbjct: 465  FEDVDITFPEDRGLIAAIQQLAETAKRPIILTSNSNNPVLPDNLDRLEVCFTLPSPKELL 524

Query: 907  SLVYMVCGAEQADINPELLDQFIRCCKGDIRKTIMLLQFWCQGKTNKIDRRIQSTYGPPH 1086
               YMVC AE+ +I P L+++FI  C+GDIRKT+M LQFWCQGK  + DR+    YGP  
Sbjct: 525  CHAYMVCAAEKTNIQPWLIERFIEYCQGDIRKTLMHLQFWCQGKRYRQDRKAHKIYGPLS 584

Query: 1087 FDVDAG 1104
            FD++AG
Sbjct: 585  FDLEAG 590


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  303 bits (775), Expect = 7e-80
 Identities = 168/345 (48%), Positives = 219/345 (63%), Gaps = 11/345 (3%)
 Frame = +1

Query: 103  ENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYSRNPKMLSRENTFVTXXXXXXX 282
            E+SLW +KYQP KA EVCGN ESV+ ++EWL  W E+ S++ K  +  +  +        
Sbjct: 32   EDSLWINKYQPEKAIEVCGNGESVKLLSEWLHLWHEKDSQSSKKATGGDKCIMQDSDNSF 91

Query: 283  XXXXXXXXMGERADLKNVLLVSGPVG-----------SGKSAAIYACAREQGFEVIEVSA 429
                    + E   LKNVLLV+GPVG           SGKSAAIYACA+EQGF +IE++ 
Sbjct: 92   YGSDSDSDLDEGTGLKNVLLVTGPVGVYTHSISTAIFSGKSAAIYACAKEQGFRIIEINT 151

Query: 430  SDWRNGAQMKLKFGAAMESLGLNKWSLEVPLGLNVKHIPEFPSTQPCKSSIQESDDDVIE 609
            S  R+G  +K + G A+ES GL + SLE P+G   KHI +     P  ++ QE +  VIE
Sbjct: 152  SGLRSGTVVKQRIGEALESHGLKR-SLENPIGSQSKHIMKSFPALPNGTATQEFESKVIE 210

Query: 610  VLPETCKDKSDSLKSGPCNVGVKDNSTASHRGADKTLILFEDVDTVFDEDRGLIASIQQI 789
            ++P + ++ S      P     K N TA  RG   TLILFEDVD  F EDRGLIA+IQQ+
Sbjct: 211  LIPSSDEEDSHDDIGTPEKHIHKKNRTACDRGETITLILFEDVDITFPEDRGLIAAIQQL 270

Query: 790  AETAKRPIILTSSSKDPLLPDQLDRVEVRFAIPLPEELSSLVYMVCGAEQADINPELLDQ 969
            AETAKRPIILTS+S +P+LPD LDR+EV F +P  +EL    YMVC AE+ +I P L+++
Sbjct: 271  AETAKRPIILTSNSNNPVLPDNLDRLEVCFTLPSLKELLCHAYMVCAAEKTNIQPWLIER 330

Query: 970  FIRCCKGDIRKTIMLLQFWCQGKTNKIDRRIQSTYGPPHFDVDAG 1104
            FI  C+GDIRKT+M LQFWCQGK  +  ++    YGP  FD+DAG
Sbjct: 331  FIEYCQGDIRKTLMHLQFWCQGKRYRQGQKAHKIYGPLSFDLDAG 375


>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  256 bits (654), Expect = 7e-66
 Identities = 158/353 (44%), Positives = 211/353 (59%), Gaps = 12/353 (3%)
 Frame = +1

Query: 82   KASEHGHENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYSRNPKMLS-RENTFV 258
            ++ E   E+SLW  KY+PTKASEVCGN ES+  + +WL  W ER  +N K  S ++ T +
Sbjct: 268  QSCEDKAESSLWIHKYKPTKASEVCGNDESLNFLRDWLHHWHERRYQNRKDSSNKDQTDI 327

Query: 259  TXXXXXXXXXXXXXXX--MGERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSAS 432
                              + E   LKNVLL++GPVGSGKSAA+YACA+EQGFEV+E++ S
Sbjct: 328  PDGDGDYNCAGCDYASKDVSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTS 387

Query: 433  DWRNGAQMKLKFGAAMESLGLNKWSLEVPLG-----LNVKHIPEFPSTQPCKSSIQESDD 597
            D RN   +K  FG A+ S  + K  +E  +G     L +   P  P+ +  K    E D 
Sbjct: 388  DCRNATAVKQYFGDALGSQCV-KSLVEHTVGSQKKTLKLLQAPASPNVKEAK----EMDH 442

Query: 598  DVIEVLPETCKDKSDSLKSGPCNVGVK----DNSTASHRGADKTLILFEDVDTVFDEDRG 765
            DVIE++       SD    GP     K    DN+  S   A +TLIL EDVD +F EDRG
Sbjct: 443  DVIEMIT-----LSDDGAHGPGGTSQKLHAIDNTLTSD--AVQTLILVEDVDILFPEDRG 495

Query: 766  LIASIQQIAETAKRPIILTSSSKDPLLPDQLDRVEVRFAIPLPEELSSLVYMVCGAEQAD 945
             IA+IQ IAETAK PIILTS+SK   LP+   R+ V F++PLP+EL   ++ VC  E+ D
Sbjct: 496  CIAAIQHIAETAKGPIILTSNSKKAGLPNNFCRLHVSFSLPLPDELLRHLFTVCATEEVD 555

Query: 946  INPELLDQFIRCCKGDIRKTIMLLQFWCQGKTNKIDRRIQSTYGPPHFDVDAG 1104
             NP L+++FI+ C  DIRKTI+ LQFW Q K    D+++Q+ YG   FD++AG
Sbjct: 556  ANPLLMEKFIQSCDRDIRKTILHLQFWFQNKKYSKDKKVQTLYGSLPFDLEAG 608


>ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837229 [Brachypodium
            distachyon]
          Length = 1272

 Score =  239 bits (609), Expect = 1e-60
 Identities = 143/331 (43%), Positives = 184/331 (55%), Gaps = 1/331 (0%)
 Frame = +1

Query: 112  LWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYSRNPKMLSRENTFVTXXXXXXXXXX 291
            LWT KY+P  A +VCGN E V+ ++EWL  W E+  +N     ++N              
Sbjct: 395  LWTDKYRPETAVQVCGNMEHVKFLSEWLKGWDEKGHKN-----KQNGVTNGSINDGYCQD 449

Query: 292  XXXXXMGERA-DLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQMKLKF 468
                   E A D +NVLL++GPVG GKSAA++ACAREQGF VIEV+ SD RNGA +K KF
Sbjct: 450  ESDTDCSEEASDFENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDTRNGAYVKQKF 509

Query: 469  GAAMESLGLNKWSLEVPLGLNVKHIPEFPSTQPCKSSIQESDDDVIEVLPETCKDKSDSL 648
              A +S GL KWS E              +T P   S+     D    +P+  +      
Sbjct: 510  EEATKSHGLEKWSQEEV------------TTPPRNDSL-----DPTSGIPDRTEYNQSIS 552

Query: 649  KSGPCNVGVKDNSTASHRGADKTLILFEDVDTVFDEDRGLIASIQQIAETAKRPIILTSS 828
             S  C    K +  A  +  +KTLILFEDVDTVFDEDRG I++I +IAET K PIILTS+
Sbjct: 553  CSVKCYSSSKSSDEAPKQVMNKTLILFEDVDTVFDEDRGFISTILKIAETTKWPIILTSN 612

Query: 829  SKDPLLPDQLDRVEVRFAIPLPEELSSLVYMVCGAEQADINPELLDQFIRCCKGDIRKTI 1008
             KDP LP  LD++ + F  P   EL S V M+C +E  ++    L   I  C GDIR+T 
Sbjct: 613  KKDPSLPHLLDQLVLDFKYPSSGELLSHVGMICKSEGVNVTASQLKYIINACLGDIRRTT 672

Query: 1009 MLLQFWCQGKTNKIDRRIQSTYGPPHFDVDA 1101
            +LLQFW QGK    +R  +   GP   D+DA
Sbjct: 673  LLLQFWYQGKHQYTERSNKCLSGPFSLDLDA 703


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  236 bits (603), Expect = 6e-60
 Identities = 146/338 (43%), Positives = 194/338 (57%), Gaps = 4/338 (1%)
 Frame = +1

Query: 103  ENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYSRNPKMLS---RENTFVTXXXX 273
            ENSLWT KY+PTKA EVCGN ESV  + +WL  W ER  ++ K +S   + +        
Sbjct: 320  ENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVDDDY 379

Query: 274  XXXXXXXXXXXMGERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQ 453
                       + E   L+NVLL++GP+GSGKSAA+YACA EQ FE++E++ASD RNG  
Sbjct: 380  KCSCSDYDSEDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQRFEILELNASDCRNGTA 439

Query: 454  MKLKFGAAMESLGLNKWSLEVPLGLNVKHIPEFP-STQPCKSSIQESDDDVIEVLPETCK 630
            ++  FG  + SLG  + S E+      K     P S      +  E +D V E++  T  
Sbjct: 440  VRNYFGDTLGSLGFKRAS-EITSSSQKKTTKLSPASALQSGKAADEVNDGVNELI--TIS 496

Query: 631  DKSDSLKSGPCNVGVKDNSTASHRGADKTLILFEDVDTVFDEDRGLIASIQQIAETAKRP 810
            D    + SG     +  N+  +     +TLIL EDVD +  EDRG IA+IQQIAETAK P
Sbjct: 497  DDEAHIPSGSSQKLLGKNNVVASCDKVQTLILIEDVDILSPEDRGCIAAIQQIAETAKGP 556

Query: 811  IILTSSSKDPLLPDQLDRVEVRFAIPLPEELSSLVYMVCGAEQADINPELLDQFIRCCKG 990
            IILTS +  P LP   D + V F +P P+EL   +Y VC  E  +I+P LL++FI  C G
Sbjct: 557  IILTSVN--PGLPGNFDVLHVSFMLPSPQELLCHLYTVCLTEGVNIHPLLLEKFIHSCDG 614

Query: 991  DIRKTIMLLQFWCQGKTNKIDRRIQSTYGPPHFDVDAG 1104
            DIRK+IM LQFW Q K  + D   Q+ YG   FD++ G
Sbjct: 615  DIRKSIMHLQFWFQSKRFQKDVMTQTCYGSLPFDLELG 652