BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029748
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   124   6e-27
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               120   1e-25
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...   116   2e-24
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   116   2e-24
gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indi...   115   3e-24

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/121 (47%), Positives = 87/121 (71%)
 Frame = +2

Query: 2   IIEALANIGNEKAPGSDGFSSFFFKCTWRIIGEDFITAARNFFHSNQLLNEVNSTCITLI 181
           I EALA IGN+KAPG DGF+++FFK +W  I ++     + FF+++++   +N   +TL+
Sbjct: 443 IDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLL 502

Query: 182 PKVQVPIALGDYRPIACCGVMYKCIAKVMTRRMKDMMPKIINSNQSAFITGRNIQDNILL 361
           PKVQ    + ++RPIACC V+YK I+K++T RMK ++ +++N  QS FI GR+I DNILL
Sbjct: 503 PKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILL 562

Query: 362 S 364
           +
Sbjct: 563 A 563


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/121 (46%), Positives = 80/121 (66%)
 Frame = +2

Query: 2   IIEALANIGNEKAPGSDGFSSFFFKCTWRIIGEDFITAARNFFHSNQLLNEVNSTCITLI 181
           I EA+  IG++KAPG DG ++ F+K  W I+G D I   + FF S+ +   VN T I +I
Sbjct: 54  IFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMI 113

Query: 182 PKVQVPIALGDYRPIACCGVMYKCIAKVMTRRMKDMMPKIINSNQSAFITGRNIQDNILL 361
           PK+Q P  L DYRPIA C V+YK I+K M  R+K  +  I++ +Q+AFI GR I DN+++
Sbjct: 114 PKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMI 173

Query: 362 S 364
           +
Sbjct: 174 A 174


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/121 (45%), Positives = 82/121 (67%)
 Frame = +2

Query: 2    IIEALANIGNEKAPGSDGFSSFFFKCTWRIIGEDFITAARNFFHSNQLLNEVNSTCITLI 181
            I + L ++ N+K+PG DGF+S FFK TW I+G +FI A ++FF    L   +N+T + LI
Sbjct: 866  IKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLPKGINTTILALI 925

Query: 182  PKVQVPIALGDYRPIACCGVMYKCIAKVMTRRMKDMMPKIINSNQSAFITGRNIQDNILL 361
            PK +    + DYRPI+CC V+YK I+K++  R+K + PK I  NQSAF+  R + +N+LL
Sbjct: 926  PKKKEAKEMKDYRPISCCNVIYKVISKIIANRLKLVPPKFIAGNQSAFVKDRLLIENVLL 985

Query: 362  S 364
            +
Sbjct: 986  A 986


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/121 (47%), Positives = 80/121 (66%)
 Frame = +2

Query: 2   IIEALANIGNEKAPGSDGFSSFFFKCTWRIIGEDFITAARNFFHSNQLLNEVNSTCITLI 181
           I EAL +I  +KAPG DGFS+ FF   W II  D     R+FF  + L   +N T +TLI
Sbjct: 374 IKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLI 433

Query: 182 PKVQVPIALGDYRPIACCGVMYKCIAKVMTRRMKDMMPKIINSNQSAFITGRNIQDNILL 361
           PK+  P  + DYRPIA C V YK +AK++TRR++  + ++I+ +QSAF+ GR I DN+L+
Sbjct: 434 PKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLI 493

Query: 362 S 364
           +
Sbjct: 494 T 494


>gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indica Group]
          Length = 492

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/121 (42%), Positives = 78/121 (64%)
 Frame = +2

Query: 2   IIEALANIGNEKAPGSDGFSSFFFKCTWRIIGEDFITAARNFFHSNQLLNEVNSTCITLI 181
           I  A+  IG  KAPG DGF + F++C W I+ +D + A R FFH+  + + VN T I LI
Sbjct: 49  IAMAVFQIGPLKAPGPDGFPARFYQCNWDIVKQDIMAAVRRFFHTGSMPSGVNETAIVLI 108

Query: 182 PKVQVPIALGDYRPIACCGVMYKCIAKVMTRRMKDMMPKIINSNQSAFITGRNIQDNILL 361
           PK+  P+ L D+RPI+ C V+YK ++K +  R++  +  +++  QSAF+ GR I DN LL
Sbjct: 109 PKIDQPVGLKDFRPISLCNVVYKVVSKCLVNRLRLCLDDLVSDEQSAFVPGRLITDNALL 168

Query: 362 S 364
           +
Sbjct: 169 A 169