BLASTX nr result

ID: Coptis21_contig00029747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029747
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18190.3| unnamed protein product [Vitis vinifera]               65   2e-17
ref|XP_002267136.2| PREDICTED: uncharacterized protein LOC100260...    65   2e-17
ref|XP_003519963.1| PREDICTED: uncharacterized protein LOC100793...    65   7e-14
ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-13
ref|XP_002526845.1| conserved hypothetical protein [Ricinus comm...    63   5e-13

>emb|CBI18190.3| unnamed protein product [Vitis vinifera]
          Length = 869

 Score = 65.5 bits (158), Expect(2) = 2e-17
 Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = +2

Query: 11  MKKRCSLFRRATDVSLVLKWIEECMLETNWWIHVQN---QGKRICQPPP 148
           +K+R SLFRR ++VSLVL+WIEECM++T WWIHVQ+   +G+ I   PP
Sbjct: 667 LKRRGSLFRRISEVSLVLQWIEECMVKTKWWIHVQSSIEEGRPIAPTPP 715



 Score = 48.5 bits (114), Expect(2) = 2e-17
 Identities = 27/39 (69%), Positives = 28/39 (71%)
 Frame = +1

Query: 202 PFSARVSLQEIVSPTTGDHILDCALLFNRTKIYGGQLVL 318
           PFSA  SL EIVSPT  DHIL+CAL F R K   GQLVL
Sbjct: 737 PFSACGSLMEIVSPTAEDHILECALFFRRIK-NDGQLVL 774



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/60 (51%), Positives = 41/60 (68%)
 Frame = +2

Query: 320 KNIILLDKNTSPPLNPDTQPIISVENHNPNENEQVLIIGRHPDCNVMLTHPSISRFHVQI 499
           KNI ++D+   PP      P IS      +  E++L++GRHPDCN+MLTHPSISRFH+QI
Sbjct: 22  KNIFVIDQ---PP------PGISEPERPEHVLEEILMVGRHPDCNIMLTHPSISRFHLQI 72


>ref|XP_002267136.2| PREDICTED: uncharacterized protein LOC100260631 [Vitis vinifera]
          Length = 211

 Score = 65.5 bits (158), Expect(2) = 2e-17
 Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = +2

Query: 11  MKKRCSLFRRATDVSLVLKWIEECMLETNWWIHVQN---QGKRICQPPP 148
           +K+R SLFRR ++VSLVL+WIEECM++T WWIHVQ+   +G+ I   PP
Sbjct: 9   LKRRGSLFRRISEVSLVLQWIEECMVKTKWWIHVQSSIEEGRPIAPTPP 57



 Score = 48.5 bits (114), Expect(2) = 2e-17
 Identities = 27/39 (69%), Positives = 28/39 (71%)
 Frame = +1

Query: 202 PFSARVSLQEIVSPTTGDHILDCALLFNRTKIYGGQLVL 318
           PFSA  SL EIVSPT  DHIL+CAL F R K   GQLVL
Sbjct: 79  PFSACGSLMEIVSPTAEDHILECALFFRRIK-NDGQLVL 116


>ref|XP_003519963.1| PREDICTED: uncharacterized protein LOC100793706 [Glycine max]
          Length = 1198

 Score = 65.5 bits (158), Expect(2) = 7e-14
 Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
 Frame = +2

Query: 2    LHRMKKRCSLFRRATDVSLVLKWIEECMLETNWWIHVQ---NQGKRICQPPP 148
            L RMKK+ ++FRR ++ SL L+WIEECM+++NWWIH+Q   ++G+ I   PP
Sbjct: 998  LERMKKQFTIFRRISEASLALEWIEECMVKSNWWIHIQSSVDEGRLIAPTPP 1049



 Score = 36.2 bits (82), Expect(2) = 7e-14
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = +1

Query: 229  EIVSPTTGDHILDCALLFNRTKIYGGQLVL 318
            EI SPT  DHILD ALL+ R K   GQLVL
Sbjct: 1072 EIASPTVEDHILDFALLYRRNK-NDGQLVL 1100



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = +2

Query: 290 LRYMADSWFFKNIILLDKNTSPPLNPDTQPIISVENHNPNENEQVLIIGRHPDCNVMLTH 469
           L  + ++   KNI +++K   PP           E     ++  VL++GRHPDC++MLTH
Sbjct: 19  LTVLKNNTILKNIFIVNK---PP-----------EEQARADHVDVLLVGRHPDCDLMLTH 64

Query: 470 PSISRFHVQI 499
           PSISRFH+QI
Sbjct: 65  PSISRFHLQI 74


>ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|222835601|gb|EEE74036.1|
            predicted protein [Populus trichocarpa]
          Length = 1079

 Score = 64.7 bits (156), Expect(2) = 2e-13
 Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = +2

Query: 11   MKKRCSLFRRATDVSLVLKWIEECMLETNWWIHVQN---QGKRICQPPP 148
            +K+R SLFR+ T+ SLVL+WIEECM+ T WWIHVQ+   +G+ I   PP
Sbjct: 866  LKRRSSLFRKKTEASLVLEWIEECMVRTPWWIHVQSSMEEGRHIAPTPP 914



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +1

Query: 202  PFSARVSLQEIVSPTTGDHILDCALLFNRTKIYGGQLVL 318
            PF A  S  EIVSPT  DHIL+ AL + +     GQL+L
Sbjct: 937  PFPAHGSFLEIVSPTAEDHILEYALSYRKMN-RDGQLIL 974



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = +2

Query: 320 KNIILLDKNTSPPLNPDTQPIISVENHNPNENEQVLIIGRHPDCNVMLTHPSISRFHVQI 499
           KNI ++DK+  P     ++P I  E +   E E++L  GRHPDC+++L HPSISRFH+QI
Sbjct: 32  KNIFVIDKSPLPSPT-SSEPSIENEENPVQETEEILSFGRHPDCSIVLNHPSISRFHLQI 90


>ref|XP_002526845.1| conserved hypothetical protein [Ricinus communis]
           gi|223533849|gb|EEF35580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 789

 Score = 62.8 bits (151), Expect(2) = 5e-13
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = +2

Query: 2   LHRMKKRCSLFRRATDVSLVLKWIEECMLETNWWIHVQN---QGKRICQPPP 148
           L  +K+R SLFRR T+  LVL+WIEECM++T WWIHVQ+    G+     PP
Sbjct: 584 LDSLKRRGSLFRRTTEADLVLQWIEECMVKTKWWIHVQSSVEDGRATAPTPP 635



 Score = 36.2 bits (82), Expect(2) = 5e-13
 Identities = 21/38 (55%), Positives = 25/38 (65%)
 Frame = +1

Query: 205 FSARVSLQEIVSPTTGDHILDCALLFNRTKIYGGQLVL 318
           FSA  SL +I+SPT  DHILD AL + +     GQLVL
Sbjct: 659 FSAYGSLLDIISPTAEDHILDYALSYRKAH-SDGQLVL 695


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