BLASTX nr result

ID: Coptis21_contig00029547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029547
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31771.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255...    70   2e-10
emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]    70   2e-10
ref|XP_002520376.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>emb|CBI31771.3| unnamed protein product [Vitis vinifera]
          Length = 1244

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
 Frame = -2

Query: 433  QTHSQSEKEKITWAENLHHSFLPSKQTTMRLMGKDVTVGRNYNEDSN--DGKVWTDKNVV 260
            Q   + +  KI   E      + + Q T+RLMGKDVT+GR+  +     DGK+WTDK ++
Sbjct: 722  QIQYKKDNGKIHPREPSDQILMHTTQPTVRLMGKDVTIGRSSKDMQGLEDGKIWTDKEII 781

Query: 259  REHYPTMIIENSSPSRSRNYEVEAISKASSAGKSEEPRIRSLGSQGNPTRSSLMQMRAVD 80
             E+  T     SS +++   +   +  A S  KS+E    +L  + N T   ++QM+A +
Sbjct: 782  TENCITSTALASSSAKAYFQQDWMLHAALS--KSKESVAHTLEMRRNQTSQRVLQMKAPE 839

Query: 79   PRLGHAYRQWWQNSMPQS 26
             R  H Y  W  N + QS
Sbjct: 840  SRFSHPYLNWQTNLVSQS 857


>ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255858 [Vitis vinifera]
          Length = 1000

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
 Frame = -2

Query: 433 QTHSQSEKEKITWAENLHHSFLPSKQTTMRLMGKDVTVGRNYNEDSN--DGKVWTDKNVV 260
           Q   + +  KI   E      + + Q T+RLMGKDVT+GR+  +     DGK+WTDK ++
Sbjct: 498 QIQYKKDNGKIHPREPSDQILMHTTQPTVRLMGKDVTIGRSSKDMQGLEDGKIWTDKEII 557

Query: 259 REHYPTMIIENSSPSRSRNYEVEAISKASSAGKSEEPRIRSLGSQGNPTRSSLMQMRAVD 80
            E+  T     SS +++   +   +  A S  KS+E    +L  + N T   ++QM+A +
Sbjct: 558 TENCITSTALASSSAKAYFQQDWMLHAALS--KSKESVAHTLEMRRNQTSQRVLQMKAPE 615

Query: 79  PRLGHAYRQWWQNSMPQS 26
            R  H Y  W  N + QS
Sbjct: 616 SRFSHPYLNWQTNLVSQS 633


>emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]
          Length = 1138

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
 Frame = -2

Query: 433  QTHSQSEKEKITWAENLHHSFLPSKQTTMRLMGKDVTVGRNYNEDSN--DGKVWTDKNVV 260
            Q   + +  KI   E      + + Q T+RLMGKDVT+GR+  +     DGK+WTDK ++
Sbjct: 636  QIQYKKDNGKIHPREPSDQILMHTTQPTVRLMGKDVTIGRSSKDMQGLEDGKIWTDKEII 695

Query: 259  REHYPTMIIENSSPSRSRNYEVEAISKASSAGKSEEPRIRSLGSQGNPTRSSLMQMRAVD 80
             E+  T     SS +++   +   +  A S  KS+E    +L  + N T   ++QM+A +
Sbjct: 696  TENCITSTALASSSAKAYFQQDWMLHAALS--KSKESVAHTLEMRRNQTSQRVLQMKAPE 753

Query: 79   PRLGHAYRQWWQNSMPQS 26
             R  H Y  W  N + QS
Sbjct: 754  SRFSHPYLNWQTNLVSQS 771


>ref|XP_002520376.1| conserved hypothetical protein [Ricinus communis]
           gi|223540423|gb|EEF41992.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 883

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
 Frame = -2

Query: 424 SQSEKEKITWAENLHHSFLPSKQTTMRLMGKDVTVGRNYNE--DSNDGKVWTDKNVVREH 251
           SQ+E +     +N  +  L +   TMRLMGKDV VGR+  E     DG +W DK +++EH
Sbjct: 381 SQNENQMAHMKKNSDNMSLKTVLPTMRLMGKDVAVGRSNTEMQSFEDGNIWMDKEIIQEH 440

Query: 250 YPTMIIENSSPSRS---RNYEVEAISKASSAGKSEEPRIRSLGSQGNPTRSSLMQMRAVD 80
            P+    ++   RS   R  + E I    +  KS+E     L  + N    S  QM+A +
Sbjct: 441 RPS----SNDLGRSLLKRQIQQERI-LCPALEKSKETLHLPLEFESNQASQSNFQMKAQE 495

Query: 79  PRLGHAYRQWWQNSMPQS 26
            R  H +  W  +S  Q+
Sbjct: 496 FRASHPFYNWKTSSAFQN 513


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