BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029533
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   205   4e-51
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     194   5e-48
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   194   8e-48
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   194   8e-48
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   194   8e-48

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  205 bits (521), Expect = 4e-51
 Identities = 92/151 (60%), Positives = 115/151 (76%)
 Frame = +2

Query: 2   DYVHTDVWGPSRVASKGGNRYYVSFIDHHSRYVWVYMMKTKDEVFETFKKWKARVETRTE 181
           DY+H+D WGP RV S GG R++VS ID +SR  WVYMMK K E F+ FK+WK  +E +T 
Sbjct: 471 DYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTG 530

Query: 182 RKVKTLRSDNGTEYTYGPFLEFCAQNGIARHWTVRGTPQQNGMAERMNRTLLEKARCLLS 361
           +K+K LR+DNG E+ +  F +FC   GIARH TVR TPQQNG+AERMN+TLLE+ARC+LS
Sbjct: 531 KKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLS 590

Query: 362 NANLDKKFWADAVAMACYLYNRSPVPAIDCK 454
           NA LD++FWA+AV+ ACYL NR P   I CK
Sbjct: 591 NAGLDRRFWAEAVSTACYLINRGPHTGIQCK 621


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/151 (60%), Positives = 112/151 (74%)
 Frame = +2

Query: 2   DYVHTDVWGPSRVASKGGNRYYVSFIDHHSRYVWVYMMKTKDEVFETFKKWKARVETRTE 181
           DY+HTDVWGPS   SKGG RY+VSFID  SR VW++ MKTK+EVF  FK+WKA V  +T 
Sbjct: 454 DYIHTDVWGPSATISKGGARYFVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTG 513

Query: 182 RKVKTLRSDNGTEYTYGPFLEFCAQNGIARHWTVRGTPQQNGMAERMNRTLLEKARCLLS 361
           RK+K LRSDNG EY    FL+ C   GI RH+TV+ +PQQNG+AERMNRTL+EK R +  
Sbjct: 514 RKIKCLRSDNGGEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRF 573

Query: 362 NANLDKKFWADAVAMACYLYNRSPVPAIDCK 454
           +A L ++FWA+A   ACYL NRSP  AI+ K
Sbjct: 574 HAGLPEEFWAEAANHACYLINRSPSRAINFK 604


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/151 (59%), Positives = 112/151 (74%)
 Frame = +2

Query: 2    DYVHTDVWGPSRVASKGGNRYYVSFIDHHSRYVWVYMMKTKDEVFETFKKWKARVETRTE 181
            DYVH+D+WGP+R  S GG RY ++ +D +SR VW Y +K K + F+ FK+WK  VE +TE
Sbjct: 700  DYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTE 759

Query: 182  RKVKTLRSDNGTEYTYGPFLEFCAQNGIARHWTVRGTPQQNGMAERMNRTLLEKARCLLS 361
            RKVK LR+DNG E+    F  +C   GI RH+TV  TPQQNG+AERMNRT++ KARCLLS
Sbjct: 760  RKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLS 819

Query: 362  NANLDKKFWADAVAMACYLYNRSPVPAIDCK 454
            NA L K+FWA+AV+ ACYL NRSP  AID K
Sbjct: 820  NAGLPKQFWAEAVSTACYLINRSPSYAIDKK 850


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/151 (59%), Positives = 112/151 (74%)
 Frame = +2

Query: 2   DYVHTDVWGPSRVASKGGNRYYVSFIDHHSRYVWVYMMKTKDEVFETFKKWKARVETRTE 181
           DYVH+D+WGP+R  S GG RY ++ +D +SR VW Y +K K + F+ FK+WK  VE +TE
Sbjct: 493 DYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTE 552

Query: 182 RKVKTLRSDNGTEYTYGPFLEFCAQNGIARHWTVRGTPQQNGMAERMNRTLLEKARCLLS 361
           RKVK LR+DNG E+    F  +C   GI RH+TV  TPQQNG+AERMNRT++ KARCLLS
Sbjct: 553 RKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLS 612

Query: 362 NANLDKKFWADAVAMACYLYNRSPVPAIDCK 454
           NA L K+FWA+AV+ ACYL NRSP  AID K
Sbjct: 613 NAGLPKQFWAEAVSTACYLINRSPSYAIDKK 643


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/151 (61%), Positives = 112/151 (74%)
 Frame = +2

Query: 2    DYVHTDVWGPSRVASKGGNRYYVSFIDHHSRYVWVYMMKTKDEVFETFKKWKARVETRTE 181
            +Y+H+D+WGPS V S  G RYYV+FID  SR VWVY +K KDEVF  FK+WK  VE RT 
Sbjct: 592  EYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTG 651

Query: 182  RKVKTLRSDNGTEYTYGPFLEFCAQNGIARHWTVRGTPQQNGMAERMNRTLLEKARCLLS 361
            + VKTLR+DNG E+    F EFC + GI RH TVR TPQQNG+AERMN+TL+++ARC+  
Sbjct: 652  KVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRI 711

Query: 362  NANLDKKFWADAVAMACYLYNRSPVPAIDCK 454
            +A L KKFWA+AV  A YL NRSP  AID K
Sbjct: 712  DAGLSKKFWAEAVNTAAYLVNRSPSTAIDFK 742