BLASTX nr result

ID: Coptis21_contig00029498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029498
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160037.1| PREDICTED: uncharacterized protein LOC101225...    70   2e-10
ref|XP_004152696.1| PREDICTED: uncharacterized protein LOC101216...    70   2e-10
ref|XP_002510386.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
gb|ACU16829.1| unknown [Glycine max]                                   60   2e-07
ref|NP_568612.1| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07

>ref|XP_004160037.1| PREDICTED: uncharacterized protein LOC101225525 [Cucumis sativus]
          Length = 231

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 12/74 (16%)
 Frame = -3

Query: 187 SPPKQIPPNQHFH------------STRRSTVYLSLISLFPTLSLSPPAHAFSIGISGPK 44
           SPP Q P N  F             ++RR    LS IS  P+L L  PA AF IGISGPK
Sbjct: 16  SPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPSLFLPAPASAFDIGISGPK 75

Query: 43  NWLREQKKKASRFL 2
           +WL+EQKKKAS+FL
Sbjct: 76  DWLKEQKKKASKFL 89


>ref|XP_004152696.1| PREDICTED: uncharacterized protein LOC101216764 [Cucumis sativus]
          Length = 231

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 12/74 (16%)
 Frame = -3

Query: 187 SPPKQIPPNQHFH------------STRRSTVYLSLISLFPTLSLSPPAHAFSIGISGPK 44
           SPP Q P N  F             ++RR    LS IS  P+L L  PA AF IGISGPK
Sbjct: 16  SPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPSLFLPAPASAFDIGISGPK 75

Query: 43  NWLREQKKKASRFL 2
           +WL+EQKKKAS+FL
Sbjct: 76  DWLKEQKKKASKFL 89


>ref|XP_002510386.1| conserved hypothetical protein [Ricinus communis]
           gi|223551087|gb|EEF52573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 145 TRRSTVYLSLISLFPTLSLSPPAHAFSIGISGPKNWLREQKKKASRFL 2
           +RR    LS+++L  +LS   PA AFSIGISGPK+WL+EQKKK+S+FL
Sbjct: 43  SRRDAALLSVLALVSSLSQPAPATAFSIGISGPKDWLKEQKKKSSKFL 90


>gb|ACU16829.1| unknown [Glycine max]
          Length = 228

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 LTNKNSPPKQ-IPPNQHFHSTRRSTVYLSLISLFPTLSLSPPAHAFSIGISGPKNWLREQ 26
           +   + PPK+ + P+     +RR    LS +SL    SLS PA A  IG+SGPKNWL++Q
Sbjct: 22  IARSSLPPKRNVSPSPFSTLSRRGIALLSFLSL----SLSAPASAIEIGMSGPKNWLKDQ 77

Query: 25  KKKASRFL 2
           KKKAS++L
Sbjct: 78  KKKASKYL 85


>ref|NP_568612.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332007476|gb|AED94859.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 229

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 148 STRRSTVYLS-LISLFPTLSLSPPAHAFSIGISGPKNWLREQKKKASRFL 2
           S R +TV LS   SL  TLS + PA AFS+GISGPK WL++QKKK+SRFL
Sbjct: 38  SRRDATVLLSSATSLLLTLSPTNPAFAFSLGISGPKEWLKDQKKKSSRFL 87


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