BLASTX nr result

ID: Coptis21_contig00029496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029496
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173434.1| hypothetical protein NitaMp095 [Nicotiana tabac...   131   7e-29
ref|YP_005090393.1| orf192 (mitochondrion) [Phoenix dactylifera]...   115   3e-24
ref|YP_004222268.1| hypothetical protein BevumaM_p029 [Beta vulg...    78   7e-20
ref|XP_002874489.1| hypothetical protein ARALYDRAFT_489701 [Arab...    98   6e-19
gb|AEN56135.1| hypothetical protein [Cucumis melo subsp. melo]         96   3e-18

>ref|YP_173434.1| hypothetical protein NitaMp095 [Nicotiana tabacum]
           gi|56806598|dbj|BAD83499.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 147

 Score =  131 bits (329), Expect = 7e-29
 Identities = 67/73 (91%), Positives = 68/73 (93%)
 Frame = +1

Query: 151 ATPARPGKATRLGVRGAIVPAASRTEYSSFLKAGVRDLFSATEKKRSRFDSAQPKDTSNT 330
           ATPARPGKATRLGVRG+IVPAASRT YSSFLKA  RDLFSATEKKRSRF SAQP DTSNT
Sbjct: 75  ATPARPGKATRLGVRGSIVPAASRTSYSSFLKARGRDLFSATEKKRSRFYSAQPNDTSNT 134

Query: 331 NDLCLECVARSLL 369
           NDLCLECVARSLL
Sbjct: 135 NDLCLECVARSLL 147


>ref|YP_005090393.1| orf192 (mitochondrion) [Phoenix dactylifera]
           gi|343478445|gb|AEM43933.1| orf192 (mitochondrion)
           [Phoenix dactylifera]
          Length = 191

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/66 (89%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
 Frame = +1

Query: 151 ATPARPGKATRLGVRGAIVPAASRTEYSSFLKAGVRDLFSATEK-KRSRFDSAQPKDTSN 327
           A PARPGKATRLGVRG+IVPAASRT YSSFLKAGVRDLFSAT+K +RSRFDSAQP DTSN
Sbjct: 110 ARPARPGKATRLGVRGSIVPAASRTSYSSFLKAGVRDLFSATDKNQRSRFDSAQPNDTSN 169

Query: 328 TNDLCL 345
           TNDLCL
Sbjct: 170 TNDLCL 175


>ref|YP_004222268.1| hypothetical protein BevumaM_p029 [Beta vulgaris subsp. maritima]
           gi|346683143|ref|YP_004842075.1| hypothetical protein
           BemaM_p027 [Beta macrocarpa] gi|54606738|dbj|BAD66761.1|
           orf176 [Beta vulgaris subsp. vulgaris]
           gi|54606773|dbj|BAD66796.1| orf176 [Beta vulgaris subsp.
           vulgaris] gi|317905703|emb|CBJ14092.1| hypothetical
           protein [Beta vulgaris subsp. maritima]
           gi|319439783|emb|CBJ17501.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|320148094|emb|CBJ20755.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500061|emb|CBX24877.1| hypothetical protein [Beta
           macrocarpa] gi|384939206|emb|CBL52052.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 176

 Score = 77.8 bits (190), Expect(2) = 7e-20
 Identities = 36/45 (80%), Positives = 38/45 (84%)
 Frame = +3

Query: 162 ETREGNPIGSQRSHSTCCLPD*IFIIFESGGKGSLFCNGKKAEQI 296
           ET EGNPIGSQR HSTC LPD IFIIFESGGKGSLFCNGK+   +
Sbjct: 117 ETWEGNPIGSQRIHSTCSLPDFIFIIFESGGKGSLFCNGKRGADL 161



 Score = 44.3 bits (103), Expect(2) = 7e-20
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +2

Query: 281 KSGADLTRHNLRIHPIPMICA 343
           K GADLTRHNL IHPIPMICA
Sbjct: 156 KRGADLTRHNLTIHPIPMICA 176


>ref|XP_002874489.1| hypothetical protein ARALYDRAFT_489701 [Arabidopsis lyrata subsp.
           lyrata] gi|297320326|gb|EFH50748.1| hypothetical protein
           ARALYDRAFT_489701 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/70 (75%), Positives = 54/70 (77%)
 Frame = +1

Query: 157 PARPGKATRLGVRGAIVPAASRTEYSSFLKAGVRDLFSATEKKRSRFDSAQPKDTSNTND 336
           PARPGKATRLGVRG+I             KA  RDLFSATEKKRSRFDSAQP DTSNTND
Sbjct: 80  PARPGKATRLGVRGSI-------------KAEGRDLFSATEKKRSRFDSAQPNDTSNTND 126

Query: 337 LCLECVARSL 366
           LCLECVARSL
Sbjct: 127 LCLECVARSL 136


>gb|AEN56135.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 174

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/79 (68%), Positives = 61/79 (77%)
 Frame = +1

Query: 151 ATPARPGKATRLGVRGAIVPAASRTEYSSFLKAGVRDLFSATEKKRSRFDSAQPKDTSNT 330
           A PARPG+A+RLGVRG+IVPA  RTEYSSF KAG RDLFSATEKK +  D  +   T + 
Sbjct: 75  ARPARPGRASRLGVRGSIVPADPRTEYSSFSKAGGRDLFSATEKKGA--DLTRHNLTMHP 132

Query: 331 NDLCLECVARSLL*KAIQA 387
             LCLEC+ARSLL KAIQA
Sbjct: 133 IPLCLECLARSLLLKAIQA 151


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