BLASTX nr result

ID: Coptis21_contig00029491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029491
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   194   8e-48
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   188   3e-46
ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like...   186   2e-45
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 342 VNGVPSCAKKDLLDQARNEWGLTGYIASDCDAVATVYEYQHYAKSPEDAVADVLKAGLDI 163
           VNGVP+CA++DL  +A+ EWG  GYI SDCDAVATVYEYQHYA SPEDAVADVLKAG DI
Sbjct: 281 VNGVPACARQDLFQKAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDI 340

Query: 162 NCGTYMLYNTRSAIEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPAKGKFGNLG 1
           NCG+YML +T+SAI+QGKV+EEDIDRALFNLFSVQ+RLGLFDG+PA G +GNLG
Sbjct: 341 NCGSYMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMRLGLFDGDPANGLYGNLG 394


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 342 VNGVPSCAKKDLLDQARNEWGLTGYIASDCDAVATVYEYQHYAKSPEDAVADVLKAGLDI 163
           VNGVP+CA++DL  +A+ EWG  GYI SDCDAVATVYEYQHYA SPEDAVADVLKAG DI
Sbjct: 260 VNGVPACARQDLFQKAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDI 319

Query: 162 NCGTYMLYNTRSAIEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPAKGKFGNLG 1
           NCG+YML +T+SAI+QGKV+EEDIDRALFNLFSVQ+RLGLFDG+PA G +GNLG
Sbjct: 320 NCGSYMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMRLGLFDGDPANGLYGNLG 373


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/114 (78%), Positives = 101/114 (88%)
 Frame = -3

Query: 342 VNGVPSCAKKDLLDQARNEWGLTGYIASDCDAVATVYEYQHYAKSPEDAVADVLKAGLDI 163
           VNGVP+CA KDLL   RN+WG  GYIASDCDAVATV+EYQ YAKS EDAVADVLKAG+DI
Sbjct: 271 VNGVPACASKDLLGLVRNKWGFEGYIASDCDAVATVFEYQKYAKSAEDAVADVLKAGMDI 330

Query: 162 NCGTYMLYNTRSAIEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPAKGKFGNLG 1
           NCGT+ML +T SAIEQG V+EED+DRALFNLFSVQ+RLGLF+G+P KGKFG LG
Sbjct: 331 NCGTFMLRHTESAIEQGLVKEEDLDRALFNLFSVQMRLGLFNGDPEKGKFGKLG 384


>ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max]
          Length = 780

 Score =  186 bits (471), Expect = 2e-45
 Identities = 88/114 (77%), Positives = 101/114 (88%)
 Frame = -3

Query: 342 VNGVPSCAKKDLLDQARNEWGLTGYIASDCDAVATVYEYQHYAKSPEDAVADVLKAGLDI 163
           VNGVP+CA ++LL  AR++WG  GYI SDCDAVATVYEYQ YAKS EDAVADVLKAG+DI
Sbjct: 268 VNGVPACASEELLGLARDKWGFKGYITSDCDAVATVYEYQKYAKSQEDAVADVLKAGMDI 327

Query: 162 NCGTYMLYNTRSAIEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPAKGKFGNLG 1
           NCGT+ML +T SAIEQGKV+EED+DRAL NLFSVQLRLGLFDG+P +G+FG LG
Sbjct: 328 NCGTFMLRHTESAIEQGKVKEEDLDRALLNLFSVQLRLGLFDGDPIRGRFGKLG 381


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/114 (74%), Positives = 101/114 (88%)
 Frame = -3

Query: 342 VNGVPSCAKKDLLDQARNEWGLTGYIASDCDAVATVYEYQHYAKSPEDAVADVLKAGLDI 163
           VNGVP+CA++DLL + R EWG  GYI SDCDAVAT++EYQ+Y+KSPEDAVA  LKAG+DI
Sbjct: 270 VNGVPACAREDLLQKPRTEWGFKGYITSDCDAVATIFEYQNYSKSPEDAVAIALKAGMDI 329

Query: 162 NCGTYMLYNTRSAIEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPAKGKFGNLG 1
           NCGTY+L N +SA+E+GK+QEEDIDRAL NLFSVQLRLGLFDG+P KG+FG LG
Sbjct: 330 NCGTYVLRNAQSAVEKGKLQEEDIDRALHNLFSVQLRLGLFDGDPRKGQFGKLG 383


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