BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029488
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arab...    61   8e-08
ref|XP_003606235.1| F-box/kelch-repeat protein [Medicago truncat...    61   8e-08
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
 Frame = +3

Query: 3   VFTLGSESWRVTENLP-DVFFF--PSL--LCQMRYNVFVNDSLHWLT------QENQFDW 149
           V++L S SW+  ++ P D+ F   P     C+  Y VF N ++HW        +EN  D 
Sbjct: 180 VYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDL 239

Query: 150 KIAAFNLGREDVKVVRIPP-EENGAIRGFGVFRERLCVVGDAYSDDLVVWVMKEYGVESS 326
            I AF+LG E+ K++  P    N      GV    LCV  +     + +WVMKEYGV+ S
Sbjct: 240 -IVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKES 298

Query: 327 WAKECVI 347
           W   C +
Sbjct: 299 WTHLCTV 305


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   VFTLGSESWRVTENLPDVFFFPSLLCQMRYNVFVNDSLHWLTQENQFDWK---IAAFNLG 173
           V++L  +SWR   ++P    +P         VF N +LHW+  EN        + A +LG
Sbjct: 182 VYSLRKQSWRRIGDMPYCVHYPGA-----NGVFANGALHWVVGENPESNVANIVVALDLG 236

Query: 174 REDVKVVRIPP-EENGAIRGFGVFRERLCVVGDAYSDDLVVWVMKEYGVESSWAK 335
            ED + V  P  ++       GV R  LC + +   + + VW+MKEYGV+ SW K
Sbjct: 237 VEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTK 291


>ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arabidopsis lyrata subsp.
           lyrata] gi|297316185|gb|EFH46608.1| hypothetical protein
           ARALYDRAFT_915515 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
 Frame = +3

Query: 3   VFTLGSESWRVTENLP--DVFFFPSLLCQMRYNVFVNDSLHWLTQENQFDWK---IAAFN 167
           V++L ++SWR   N+P  DV FF S        V +N ++HW++   + +     + AF+
Sbjct: 220 VYSLKTDSWRRICNMPYKDVCFFTS--------VELNGAIHWISIPRRGETSQKVVTAFD 271

Query: 168 LGREDVKVVRIPP--EENGAI---RGFGVFRERLCVVGDAYSDDLVVWVMKEYGVESSWA 332
           L  E  +V+ +P   EE   I      G+ + RLCVV        V+WVM EYG+ESSW+
Sbjct: 272 LTTEKFRVMSLPDLAEECEHIYPKSKVGILKGRLCVVYFCMKIHDVIWVMNEYGLESSWS 331

Query: 333 K 335
           K
Sbjct: 332 K 332


>ref|XP_003606235.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355507290|gb|AES88432.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 389

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
 Frame = +3

Query: 3   VFTLGSESWRVTENLP--DVFFFPSLLCQMRYNVFVNDSLHWLTQENQFDWK---IAAFN 167
           V TLG+  W+  +  P  DV       C  +Y +FV+ +++WLT  +++      I +F+
Sbjct: 212 VHTLGTNFWKSIQECPFGDV-------CTKQYVIFVSGTINWLTSIDKYRQSALFIVSFD 264

Query: 168 LGREDVKVVRIPPEENGAIRG---FGVFRERLCVVGDAYSDDLVVWVMKEYGVESSWAK 335
           L +E  + V +PP++ G        GV R+ LC++     +D  VWVMKEYG++ SW K
Sbjct: 265 LEKEFCRKV-LPPDDEGVDVSNLTLGVLRDFLCIIS---GND--VWVMKEYGIQESWTK 317


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
 Frame = +3

Query: 3   VFTLGSESWRVTENLPDVFFFPSLLCQMRYNVFVNDSLHWLTQENQFDWK----IAAFNL 170
           V TLG+  WR  ++    + F  L+  M+   FV+ +++WL  + QF W+    I +F+L
Sbjct: 204 VHTLGTNIWRTIQD----YHFGGLIVPMK-GEFVSGTINWLFSKEQF-WEYPCFIVSFDL 257

Query: 171 GREDVKVVRIPPEENGA----IRGFGVFRERLCVVGDAYSDDLVVWVMKEYGVESSWAK 335
            +E  + +  PP   G     +   GV R+ LCV    Y     VW+MKEYG + SW K
Sbjct: 258 AKESYQKIS-PPNLGGVDVCDLSALGVLRDCLCVTTSGYD----VWLMKEYGNKESWTK 311