BLASTX nr result

ID: Coptis21_contig00029483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029483
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...   237   5e-96
ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D...   236   8e-96
gb|AFW56467.1| putative cellulose synthase-like family protein [...   222   3e-90
ref|NP_001136615.1| uncharacterized protein LOC100216739 [Zea ma...   222   3e-90
gb|ACN35607.1| unknown [Zea mays]                                     222   3e-90

>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
            [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
            synthase A catalytic subunit 3 [UDP-forming], putative
            [Ricinus communis]
          Length = 1162

 Score =  237 bits (604), Expect(2) = 5e-96
 Identities = 116/142 (81%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AEYQGRLLQELQGKGSLGRPAGSLAVPSEPLDAATVAEAVTVISCFYEDKTEWGQRVGWI 181
            AEYQGRLLQ++QG+G+ GRPAGSLAVP EPLDAATVAEA++VISCFYEDKTEWG+RVGWI
Sbjct: 799  AEYQGRLLQDVQGRGNHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWI 858

Query: 182  YG-LMEDVVTGYRMHNRGWRSIY*LCHQEDAF*GTAPINLPDRLHQVLLWATGSEEIFFS 358
            YG + EDVVTGYRMHNRGWRS+Y    + DAF GTAPINL DRLHQVL WATGS EIFFS
Sbjct: 859  YGSVTEDVVTGYRMHNRGWRSVY-CVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFS 917

Query: 359  KNNALFASPRMKFLHRIAYFNV 424
            +NNALFASPRMKFL R+AYFNV
Sbjct: 918  RNNALFASPRMKFLQRVAYFNV 939



 Score =  140 bits (354), Expect(2) = 5e-96
 Identities = 69/103 (66%), Positives = 76/103 (73%)
 Frame = +3

Query: 420  MCPFTSIFILVYCILPALSLFTGQFIVQXXXXXXXXXXXXXXXXXXXXXXXEIKWSGITL 599
            M PFTS+F++VYCILPA+SLF+GQFIVQ                       EIKWSGITL
Sbjct: 941  MYPFTSMFLIVYCILPAVSLFSGQFIVQSLSVTFLVFLLAITMTLCLLALLEIKWSGITL 1000

Query: 600  HDWWRNEQFWLIAGTSAYPAVVLQGILNVIAGVDISFTLTSKS 728
            HDWWRNEQFWLI GTSA+PA VLQG+L VIAGVDISFTLTSKS
Sbjct: 1001 HDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKS 1043


>ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D5-like [Glycine max]
          Length = 1151

 Score =  236 bits (603), Expect(2) = 8e-96
 Identities = 117/142 (82%), Positives = 126/142 (88%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AEYQGRLLQELQGKGSLGRPAGSLAVPSEPLDAATVAEAVTVISCFYEDKTEWGQRVGWI 181
            AEYQGRLLQ+LQGKG+ GRPAGSLAVP EPLDAATVAEA++VISCFYEDKTEWG+RVGWI
Sbjct: 787  AEYQGRLLQDLQGKGTQGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWI 846

Query: 182  YG-LMEDVVTGYRMHNRGWRSIY*LCHQEDAF*GTAPINLPDRLHQVLLWATGSEEIFFS 358
            YG + EDVVTGYRMHNRGWRS+Y    Q DAF GTAPINL DRLHQVL WATGS EIF S
Sbjct: 847  YGSVTEDVVTGYRMHNRGWRSVY-CVTQRDAFRGTAPINLTDRLHQVLRWATGSVEIFLS 905

Query: 359  KNNALFASPRMKFLHRIAYFNV 424
            +NNAL ASPRMKFL R+AYFNV
Sbjct: 906  RNNALLASPRMKFLQRVAYFNV 927



 Score =  140 bits (353), Expect(2) = 8e-96
 Identities = 69/103 (66%), Positives = 75/103 (72%)
 Frame = +3

Query: 420  MCPFTSIFILVYCILPALSLFTGQFIVQXXXXXXXXXXXXXXXXXXXXXXXEIKWSGITL 599
            M PFTSIF++VYC LPA+SLF+GQFIVQ                       EIKWSGITL
Sbjct: 929  MYPFTSIFLIVYCFLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITL 988

Query: 600  HDWWRNEQFWLIAGTSAYPAVVLQGILNVIAGVDISFTLTSKS 728
            HDWWRNEQFWLI GTSA+PA VLQG+L VIAGVDISFTLTSKS
Sbjct: 989  HDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKS 1031


>gb|AFW56467.1| putative cellulose synthase-like family protein [Zea mays]
          Length = 1217

 Score =  222 bits (565), Expect(2) = 3e-90
 Identities = 111/142 (78%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    AEYQGRLLQELQGKGSLGRPAGSLAVPSEPLDAATVAEAVTVISCFYEDKTEWGQRVGWI 181
            AEYQGRLLQ+  G    GRPAG+LAVP EPLDA TVAEA++VISCFYEDKTEWG+R+GWI
Sbjct: 851  AEYQGRLLQDTPGAHQ-GRPAGALAVPREPLDADTVAEAISVISCFYEDKTEWGRRIGWI 909

Query: 182  YG-LMEDVVTGYRMHNRGWRSIY*LCHQEDAF*GTAPINLPDRLHQVLLWATGSEEIFFS 358
            YG + EDVVTGYRMHNRGWRS+Y +  + DAF GTAPINL DRLHQVL WATGS EIFFS
Sbjct: 910  YGSVTEDVVTGYRMHNRGWRSVYCVTRR-DAFRGTAPINLTDRLHQVLRWATGSVEIFFS 968

Query: 359  KNNALFASPRMKFLHRIAYFNV 424
            +NNALFASPRMKFL R+AYFNV
Sbjct: 969  RNNALFASPRMKFLQRVAYFNV 990



 Score =  136 bits (343), Expect(2) = 3e-90
 Identities = 66/102 (64%), Positives = 75/102 (73%)
 Frame = +3

Query: 420  MCPFTSIFILVYCILPALSLFTGQFIVQXXXXXXXXXXXXXXXXXXXXXXXEIKWSGITL 599
            M PFTSIF+LVYC+LPA+SLF+G+FIVQ                       EIKWSGITL
Sbjct: 992  MYPFTSIFLLVYCVLPAVSLFSGKFIVQSLNATFLALLLVITITLCLLALLEIKWSGITL 1051

Query: 600  HDWWRNEQFWLIAGTSAYPAVVLQGILNVIAGVDISFTLTSK 725
            H+WWRNEQFW+I GTSA+PA VLQG+L VIAGVDISFTLTSK
Sbjct: 1052 HEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 1093


>ref|NP_001136615.1| uncharacterized protein LOC100216739 [Zea mays]
           gi|194696380|gb|ACF82274.1| unknown [Zea mays]
          Length = 513

 Score =  222 bits (565), Expect(2) = 3e-90
 Identities = 111/142 (78%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   AEYQGRLLQELQGKGSLGRPAGSLAVPSEPLDAATVAEAVTVISCFYEDKTEWGQRVGWI 181
           AEYQGRLLQ+  G    GRPAG+LAVP EPLDA TVAEA++VISCFYEDKTEWG+R+GWI
Sbjct: 147 AEYQGRLLQDTPGAHQ-GRPAGALAVPREPLDADTVAEAISVISCFYEDKTEWGRRIGWI 205

Query: 182 YG-LMEDVVTGYRMHNRGWRSIY*LCHQEDAF*GTAPINLPDRLHQVLLWATGSEEIFFS 358
           YG + EDVVTGYRMHNRGWRS+Y +  + DAF GTAPINL DRLHQVL WATGS EIFFS
Sbjct: 206 YGSVTEDVVTGYRMHNRGWRSVYCVTRR-DAFRGTAPINLTDRLHQVLRWATGSVEIFFS 264

Query: 359 KNNALFASPRMKFLHRIAYFNV 424
           +NNALFASPRMKFL R+AYFNV
Sbjct: 265 RNNALFASPRMKFLQRVAYFNV 286



 Score =  136 bits (343), Expect(2) = 3e-90
 Identities = 66/102 (64%), Positives = 75/102 (73%)
 Frame = +3

Query: 420 MCPFTSIFILVYCILPALSLFTGQFIVQXXXXXXXXXXXXXXXXXXXXXXXEIKWSGITL 599
           M PFTSIF+LVYC+LPA+SLF+G+FIVQ                       EIKWSGITL
Sbjct: 288 MYPFTSIFLLVYCVLPAVSLFSGKFIVQSLNATFLALLLVITITLCLLALLEIKWSGITL 347

Query: 600 HDWWRNEQFWLIAGTSAYPAVVLQGILNVIAGVDISFTLTSK 725
           H+WWRNEQFW+I GTSA+PA VLQG+L VIAGVDISFTLTSK
Sbjct: 348 HEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 389


>gb|ACN35607.1| unknown [Zea mays]
          Length = 504

 Score =  222 bits (565), Expect(2) = 3e-90
 Identities = 111/142 (78%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   AEYQGRLLQELQGKGSLGRPAGSLAVPSEPLDAATVAEAVTVISCFYEDKTEWGQRVGWI 181
           AEYQGRLLQ+  G    GRPAG+LAVP EPLDA TVAEA++VISCFYEDKTEWG+R+GWI
Sbjct: 138 AEYQGRLLQDTPGAHQ-GRPAGALAVPREPLDADTVAEAISVISCFYEDKTEWGRRIGWI 196

Query: 182 YG-LMEDVVTGYRMHNRGWRSIY*LCHQEDAF*GTAPINLPDRLHQVLLWATGSEEIFFS 358
           YG + EDVVTGYRMHNRGWRS+Y +  + DAF GTAPINL DRLHQVL WATGS EIFFS
Sbjct: 197 YGSVTEDVVTGYRMHNRGWRSVYCVTRR-DAFRGTAPINLTDRLHQVLRWATGSVEIFFS 255

Query: 359 KNNALFASPRMKFLHRIAYFNV 424
           +NNALFASPRMKFL R+AYFNV
Sbjct: 256 RNNALFASPRMKFLQRVAYFNV 277



 Score =  136 bits (343), Expect(2) = 3e-90
 Identities = 66/102 (64%), Positives = 75/102 (73%)
 Frame = +3

Query: 420 MCPFTSIFILVYCILPALSLFTGQFIVQXXXXXXXXXXXXXXXXXXXXXXXEIKWSGITL 599
           M PFTSIF+LVYC+LPA+SLF+G+FIVQ                       EIKWSGITL
Sbjct: 279 MYPFTSIFLLVYCVLPAVSLFSGKFIVQSLNATFLALLLVITITLCLLALLEIKWSGITL 338

Query: 600 HDWWRNEQFWLIAGTSAYPAVVLQGILNVIAGVDISFTLTSK 725
           H+WWRNEQFW+I GTSA+PA VLQG+L VIAGVDISFTLTSK
Sbjct: 339 HEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 380


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