BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029465
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_002527664.1| rad1 DNA damage checkpoint protein, putative...   218   7e-55
gb|ABD65164.1| hypothetical protein 40.t00049 [Brassica oleracea]     210   2e-52
ref|XP_002870087.1| damaged DNA binding protein [Arabidopsis lyr...   210   2e-52
emb|CBI33853.3| unnamed protein product [Vitis vinifera]              210   2e-52

>ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|222834061|gb|EEE72538.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  222 bits (566), Expect = 3e-56
 Identities = 112/136 (82%), Positives = 124/136 (91%), Gaps = 2/136 (1%)
 Frame = +1

Query: 172 MSSS--EAEEADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAK 345
           MSSS  EA+ +DLVCQLDNVQG+VDALS+VRWKRHQD+VVELSEHGIVLIVEE+GCLQAK
Sbjct: 1   MSSSAIEADTSDLVCQLDNVQGIVDALSTVRWKRHQDAVVELSEHGIVLIVEETGCLQAK 60

Query: 346 VYLKKELFVSYDYRAQGRPRFGISLGLFVDCLNTFSVPGRTSTTIEISYPGPDMQLLLKS 525
           VYL+KELF+ Y+Y AQGRPRFG+SLGLFVDCLNTFSVPG  S+TIEI YPGPDMQLL+KS
Sbjct: 61  VYLQKELFIRYEYTAQGRPRFGLSLGLFVDCLNTFSVPGH-SSTIEIRYPGPDMQLLIKS 119

Query: 526 VDLPDPCIYAEIRTRI 573
            D  D CIYAEIRTRI
Sbjct: 120 ADSLDDCIYAEIRTRI 135


>ref|XP_002527664.1| rad1 DNA damage checkpoint protein, putative [Ricinus communis]
           gi|223532969|gb|EEF34735.1| rad1 DNA damage checkpoint
           protein, putative [Ricinus communis]
          Length = 302

 Score =  218 bits (554), Expect = 7e-55
 Identities = 106/133 (79%), Positives = 119/133 (89%)
 Frame = +1

Query: 175 SSSEAEEADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAKVYL 354
           S+++AE  DLVCQLDNVQGMVDALS+VRWKRHQD+VVELSEHG+VLIVEE+GCLQAKVYL
Sbjct: 4   SATDAEAPDLVCQLDNVQGMVDALSAVRWKRHQDAVVELSEHGVVLIVEETGCLQAKVYL 63

Query: 355 KKELFVSYDYRAQGRPRFGISLGLFVDCLNTFSVPGRTSTTIEISYPGPDMQLLLKSVDL 534
           +KELF  Y+Y  +GRPRFG+SLGLFVDCLNTFSVPG  S  IEI YPGPD+QLL+KSVD 
Sbjct: 64  QKELFSRYEYNGEGRPRFGVSLGLFVDCLNTFSVPGHQS-AIEIQYPGPDLQLLIKSVDS 122

Query: 535 PDPCIYAEIRTRI 573
            D CIYAEIRTRI
Sbjct: 123 IDACIYAEIRTRI 135


>gb|ABD65164.1| hypothetical protein 40.t00049 [Brassica oleracea]
          Length = 297

 Score =  210 bits (534), Expect = 2e-52
 Identities = 104/136 (76%), Positives = 116/136 (85%)
 Frame = +1

Query: 166 NKMSSSEAEEADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAK 345
           N   + E +  DLVCQLDNVQGMVDAL+ VRWKRHQD++VELSEHGIVLIVEESGCLQAK
Sbjct: 2   NSSPAIEQDAPDLVCQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCLQAK 61

Query: 346 VYLKKELFVSYDYRAQGRPRFGISLGLFVDCLNTFSVPGRTSTTIEISYPGPDMQLLLKS 525
           VYL++ELF  Y+Y A+GRPRFGISLGL VDCLNTFS PG  S TIEI YPGPDM+LLLKS
Sbjct: 62  VYLQRELFTKYEYGAEGRPRFGISLGLLVDCLNTFSSPGH-SNTIEIKYPGPDMELLLKS 120

Query: 526 VDLPDPCIYAEIRTRI 573
           VD  + CIY+EIRTRI
Sbjct: 121 VDTLNSCIYSEIRTRI 136


>ref|XP_002870087.1| damaged DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315923|gb|EFH46346.1| damaged DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  210 bits (534), Expect = 2e-52
 Identities = 107/139 (76%), Positives = 118/139 (84%), Gaps = 5/139 (3%)
 Frame = +1

Query: 172 MSSS-----EAEEADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCL 336
           MSSS     E +  DL+CQLDNVQGMVDAL+ VRWKRHQD++VELSEHGIVLIVEESGCL
Sbjct: 1   MSSSSSPAIEPDTPDLICQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCL 60

Query: 337 QAKVYLKKELFVSYDYRAQGRPRFGISLGLFVDCLNTFSVPGRTSTTIEISYPGPDMQLL 516
           QAKVYL++ELF  Y+Y AQGRPRFGISLGL VDCLNTFS PG  S TIEI YPGPDM+LL
Sbjct: 61  QAKVYLQRELFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGH-SNTIEIKYPGPDMELL 119

Query: 517 LKSVDLPDPCIYAEIRTRI 573
           LKSVD  + CIY+EIRTRI
Sbjct: 120 LKSVDTLNACIYSEIRTRI 138


>emb|CBI33853.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  210 bits (534), Expect = 2e-52
 Identities = 103/125 (82%), Positives = 114/125 (91%)
 Frame = +1

Query: 199 DLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAKVYLKKELFVSY 378
           DLVCQLDNVQGMVDAL++VRWKRHQD+V+ELSEHG+VLIVEE+ CLQAKVYL++ELFV Y
Sbjct: 7   DLVCQLDNVQGMVDALTAVRWKRHQDAVMELSEHGVVLIVEETRCLQAKVYLQRELFVQY 66

Query: 379 DYRAQGRPRFGISLGLFVDCLNTFSVPGRTSTTIEISYPGPDMQLLLKSVDLPDPCIYAE 558
           +Y AQGRPRFG+SL LFV+CLNTFSVPGR S  IEI YPGPDMQLLLKSVD  D CIYAE
Sbjct: 67  EYSAQGRPRFGVSLSLFVNCLNTFSVPGR-SNMIEIRYPGPDMQLLLKSVDSMDACIYAE 125

Query: 559 IRTRI 573
           IRTRI
Sbjct: 126 IRTRI 130