BLASTX nr result

ID: Coptis21_contig00029463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029463
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264...   218   3e-55
ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-48
ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_003527910.1| PREDICTED: uncharacterized protein LOC100814...   184   5e-45
ref|XP_003523823.1| PREDICTED: uncharacterized protein LOC100787...   184   5e-45

>ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264413 [Vitis vinifera]
          Length = 332

 Score =  218 bits (556), Expect = 3e-55
 Identities = 108/152 (71%), Positives = 121/152 (79%), Gaps = 3/152 (1%)
 Frame = -3

Query: 475 RTHLALMPKPICSPARPMDSTKRHNRIDKQHHH---HHLGRSSNRIGRAANSPVLWAKTK 305
           R HL LMPKPICSPARP + +KRH     QHHH   HHL +SS R G  A SP+LWAKTK
Sbjct: 21  RAHLTLMPKPICSPARPSEPSKRHQHQHHQHHHNHPHHLKKSSTRNGGQA-SPLLWAKTK 79

Query: 304 SMECDMSEPTSPKVSCAGQIKVRSKTDSCKNWQSVMEEIERLHNNRKQKKRKPTWVEALG 125
            M  ++SEPTSPKV+CAGQIKVR KT SCKNWQSVMEEIER+HNN+K KKR PTWVEALG
Sbjct: 80  PMGTEISEPTSPKVTCAGQIKVRHKTSSCKNWQSVMEEIERIHNNKKHKKR-PTWVEALG 138

Query: 124 LKKDVMQFLSCLRGLRFDLRCFGSFHESVITS 29
            KK++MQFL+CLR +RFD RCFGSF ES  TS
Sbjct: 139 FKKEIMQFLTCLRSIRFDFRCFGSFPESGNTS 170


>ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|222842770|gb|EEE80317.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  194 bits (494), Expect = 5e-48
 Identities = 96/155 (61%), Positives = 118/155 (76%), Gaps = 6/155 (3%)
 Frame = -3

Query: 475 RTHLALMPKPICSPARPMDSTKRHNRIDKQHHH-----HHLGRSSNRIGRAANSPVLWAK 311
           R HL LMPKPICSPARP++ +K H     +HHH     HHL +SS R G +  SP+LW K
Sbjct: 21  RAHLTLMPKPICSPARPLEPSKPHQN---RHHHRQQRPHHLKKSSPRGGGSRASPLLWTK 77

Query: 310 TKSMECDMSEPTSPKVSCAGQIKVRSKTDSCKNWQSVMEEIERLHNNRKQKKRKPTWVEA 131
           T+ M+ ++SEPTSPKV+CAGQIKVR K  SCKNWQSVMEEIER+H ++K  K K TW+++
Sbjct: 78  TRQMDSELSEPTSPKVTCAGQIKVRHKASSCKNWQSVMEEIERIHISKKSTK-KSTWLDS 136

Query: 130 LGLKKDVMQFLSCLRGLRFDLRCFGSF-HESVITS 29
           LG KKD+MQFL+CLR +RFD RCFGSF  +S ITS
Sbjct: 137 LGFKKDIMQFLTCLRNIRFDFRCFGSFPAQSDITS 171


>ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|222856835|gb|EEE94382.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/144 (64%), Positives = 111/144 (77%), Gaps = 2/144 (1%)
 Frame = -3

Query: 475 RTHLALMPKPICSPARPMDSTK-RHNRID-KQHHHHHLGRSSNRIGRAANSPVLWAKTKS 302
           R HL LMPKPICSPARP +++K R NR   +Q  HHHL +SS R      SP+LWAK K 
Sbjct: 21  RAHLTLMPKPICSPARPSETSKPRQNRHHHQQQRHHHLKKSSTRGVGIRASPLLWAKAKQ 80

Query: 301 MECDMSEPTSPKVSCAGQIKVRSKTDSCKNWQSVMEEIERLHNNRKQKKRKPTWVEALGL 122
           M  ++SEPTSPKV+CAGQIKVR K  SCKNWQSVMEEIE++HN+RK  K K TW+++LG 
Sbjct: 81  MGSEVSEPTSPKVTCAGQIKVRHKESSCKNWQSVMEEIEKIHNSRKHTK-KSTWIDSLGF 139

Query: 121 KKDVMQFLSCLRGLRFDLRCFGSF 50
           KKD+M FL+CLR +RFD RCFGSF
Sbjct: 140 KKDIMHFLTCLRNIRFDFRCFGSF 163


>ref|XP_003527910.1| PREDICTED: uncharacterized protein LOC100814916 [Glycine max]
          Length = 353

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/145 (61%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
 Frame = -3

Query: 475 RTHLALMPKPICSPARPMDSTKRHNRIDKQHHHHHLGRSSNRIGRAAN---SPVLWAKTK 305
           R HL LMPKPICSPARP +  KRH+     + HHH  +S +R G       SP+LW KTK
Sbjct: 26  RAHLTLMPKPICSPARPSEPNKRHH-----NSHHHRKKSFSRGGGGGGGQASPLLWPKTK 80

Query: 304 SMECDMSEPTSPKVSCAGQIKVRSKTDSCKNWQSVMEEIERLHNNRKQKKRKPTWVEALG 125
           SM  ++SEPTSPKV+CAGQIKVR KT +C++WQSVMEEIE++H ++ QKKR  +W E LG
Sbjct: 81  SMGSEISEPTSPKVTCAGQIKVRPKTTACRSWQSVMEEIEKIHTDKNQKKRL-SWAETLG 139

Query: 124 LKKDVMQFLSCLRGLRFDLRCFGSF 50
            KK++MQFL+CLR +RFDLRCFGSF
Sbjct: 140 FKKEIMQFLTCLRSIRFDLRCFGSF 164


>ref|XP_003523823.1| PREDICTED: uncharacterized protein LOC100787579 [Glycine max]
          Length = 293

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/149 (60%), Positives = 112/149 (75%)
 Frame = -3

Query: 475 RTHLALMPKPICSPARPMDSTKRHNRIDKQHHHHHLGRSSNRIGRAANSPVLWAKTKSME 296
           R HL LMPKPICSPARP +  KRH+R           +S +R G    SP+LWAKTKSM 
Sbjct: 23  RAHLTLMPKPICSPARPAEPNKRHHR----------KKSFSRGGGGPASPLLWAKTKSMG 72

Query: 295 CDMSEPTSPKVSCAGQIKVRSKTDSCKNWQSVMEEIERLHNNRKQKKRKPTWVEALGLKK 116
            +++EPTSPKV+CAGQIKVR KT SC++WQSVMEEIE++H ++KQ+KR   W E LG KK
Sbjct: 73  SEITEPTSPKVTCAGQIKVRPKTTSCRSWQSVMEEIEKIHTDKKQRKRL-GWAETLGFKK 131

Query: 115 DVMQFLSCLRGLRFDLRCFGSFHESVITS 29
           ++MQFL+CLR +RFDLRCFGSF E+ I +
Sbjct: 132 EIMQFLTCLRSIRFDLRCFGSFSETDIVT 160


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