BLASTX nr result

ID: Coptis21_contig00029460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029460
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047001.1| Os02g0527100 [Oryza sativa Japonica Group] g...   145   4e-33
gb|EEE57111.1| hypothetical protein OsJ_06974 [Oryza sativa Japo...   145   4e-33
gb|EEC73301.1| hypothetical protein OsI_07472 [Oryza sativa Indi...   145   4e-33
dbj|BAG88670.1| unnamed protein product [Oryza sativa Japonica G...   145   4e-33
ref|XP_003572575.1| PREDICTED: putative SWI/SNF-related matrix-a...   144   8e-33

>ref|NP_001047001.1| Os02g0527100 [Oryza sativa Japonica Group]
           gi|49388292|dbj|BAD25407.1| putative DNA repair protein
           rad8 [Oryza sativa Japonica Group]
           gi|113536532|dbj|BAF08915.1| Os02g0527100 [Oryza sativa
           Japonica Group]
          Length = 810

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/74 (95%), Positives = 74/74 (100%)
 Frame = -2

Query: 222 VNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 43
           +NLTAASNAFVMDPWWNPAVEEQA+MRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ
Sbjct: 726 INLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 785

Query: 42  RLISGALTDQEVRS 1
           R+ISGALTDQEVRS
Sbjct: 786 RMISGALTDQEVRS 799


>gb|EEE57111.1| hypothetical protein OsJ_06974 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/74 (95%), Positives = 74/74 (100%)
 Frame = -2

Query: 222  VNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 43
            +NLTAASNAFVMDPWWNPAVEEQA+MRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ
Sbjct: 944  INLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 1003

Query: 42   RLISGALTDQEVRS 1
            R+ISGALTDQEVRS
Sbjct: 1004 RMISGALTDQEVRS 1017


>gb|EEC73301.1| hypothetical protein OsI_07472 [Oryza sativa Indica Group]
          Length = 1031

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/74 (95%), Positives = 74/74 (100%)
 Frame = -2

Query: 222  VNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 43
            +NLTAASNAFVMDPWWNPAVEEQA+MRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ
Sbjct: 947  INLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 1006

Query: 42   RLISGALTDQEVRS 1
            R+ISGALTDQEVRS
Sbjct: 1007 RMISGALTDQEVRS 1020


>dbj|BAG88670.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 607

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/74 (95%), Positives = 74/74 (100%)
 Frame = -2

Query: 222 VNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 43
           +NLTAASNAFVMDPWWNPAVEEQA+MRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ
Sbjct: 523 INLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 582

Query: 42  RLISGALTDQEVRS 1
           R+ISGALTDQEVRS
Sbjct: 583 RMISGALTDQEVRS 596


>ref|XP_003572575.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Brachypodium distachyon]
          Length = 1018

 Score =  144 bits (363), Expect = 8e-33
 Identities = 71/74 (95%), Positives = 74/74 (100%)
 Frame = -2

Query: 222  VNLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 43
            +NLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ
Sbjct: 934  INLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQ 993

Query: 42   RLISGALTDQEVRS 1
            R+ISGALTDQEVR+
Sbjct: 994  RMISGALTDQEVRT 1007


Top