BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029458
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   116   2e-24
emb|CBI15196.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15

>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/82 (60%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   FVLNVCAKLGFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVVKARRVFDEM 181
           F++  CA+   LREGEQVHGR++  G C++VFV+T+LVN+YA++GG DGV KARRVFDE+
Sbjct: 137 FLIGGCARSXLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI 196

Query: 182 TERSVVTWNTMLAGYLRCGFVD 247
            +R++V+WN++LAGY+RCG VD
Sbjct: 197 VDRNIVSWNSLLAGYVRCGDVD 218


>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/82 (60%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   FVLNVCAKLGFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVVKARRVFDEM 181
           F++  CA+   LREGEQVHGR++  G C++VFV+T+LVN+YA++GG DGV KARRVFDE+
Sbjct: 35  FLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI 94

Query: 182 TERSVVTWNTMLAGYLRCGFVD 247
            +R++V+WN++LAGY+RCG VD
Sbjct: 95  VDRNIVSWNSLLAGYVRCGDVD 116


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/82 (60%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   FVLNVCAKLGFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVVKARRVFDEM 181
           F++  CA+   LREGEQVHGR++  G C++VFV+T+LVN+YA++GG DGV KARRVFDE+
Sbjct: 121 FLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI 180

Query: 182 TERSVVTWNTMLAGYLRCGFVD 247
            +R++V+WN++LAGY+RCG VD
Sbjct: 181 VDRNIVSWNSLLAGYVRCGDVD 202


>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = +2

Query: 5   VLNVCAKLGFLREGEQVHGRILCKGVCSDVFVQTNLVNMYALSGGDDGVVKARRVFDEMT 184
           +L+ CA+ G ++EGEQVH  +L KG CS+VFV T+L+  YA   G  GV +AR VFD M 
Sbjct: 47  LLSACARGGLVKEGEQVHATVLVKGYCSNVFVDTSLITFYA---GRGGVERARHVFDGMP 103

Query: 185 ERSVVTWNTMLAGYLRCGFVD 247
           +RSVV+WN+MLAGY+RC   D
Sbjct: 104 QRSVVSWNSMLAGYVRCADFD 124


>ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   FVLNVCAKLGFLREGEQVHGRILCKGVCSDVFVQTNLVNMYAL--SGGDDGVVKARRVFD 175
           F+L+ C +    REGEQ+HGR+L  G  S+++V+TNL+N+YA    GGD  + +AR +FD
Sbjct: 130 FLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFD 189

Query: 176 EMTERSVVTWNTMLAGYLRCGFVD 247
           EM + +VV WN++LAGY+R G  D
Sbjct: 190 EMPDSNVVGWNSLLAGYVRRGDFD 213