BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029443
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...    63   3e-08
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]    63   3e-08
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu...    57   2e-06
ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig...    56   3e-06
gb|ACU23737.1| unknown [Glycine max]                                   56   3e-06

>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 14/80 (17%)
 Frame = +3

Query: 102 MAERFY---IQELPSHLLIEILTSSAHLTATDLVSLEQTCQTI-----------RSIIEY 239
           MA R++    +ELPSHL++EIL SS  L+A DLV LE T +T            RS++++
Sbjct: 1   MANRYWSVSFEELPSHLILEIL-SSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDF 59

Query: 240 VAFHLCASHTIYVSLNVNAK 299
            AF LC SH IY +L++NA+
Sbjct: 60  AAFQLCGSHPIYAALSLNAQ 79


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 14/80 (17%)
 Frame = +3

Query: 102 MAERFY---IQELPSHLLIEILTSSAHLTATDLVSLEQTCQTI-----------RSIIEY 239
           MA R++    +ELPSHL++EIL SS  L+A DLV LE T +T            RS++++
Sbjct: 1   MANRYWSVSFEELPSHLILEIL-SSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDF 59

Query: 240 VAFHLCASHTIYVSLNVNAK 299
            AF LC SH IY +L++NA+
Sbjct: 60  AAFQLCGSHPIYAALSLNAQ 79


>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 497

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 11/71 (15%)
 Frame = +3

Query: 120 IQELPSHLLIEILTSSAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASH 266
           I ELPSHL++EIL +   L+ATDLV LE T +T            +S++++ AF LCASH
Sbjct: 10  IDELPSHLILEILMTG-RLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFAAFQLCASH 68

Query: 267 TIYVSLNVNAK 299
           ++Y  +  NA+
Sbjct: 69  SVYTGMLWNAQ 79


>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
 Frame = +3

Query: 102 MAER---FYIQELPSHLLIEILTSSAHLTATDLVSLEQTCQTI-----------RSIIEY 239
           M ER   F I+ELPSHL++EIL S   L+A DLV LE T +T            +S++ +
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAF 59

Query: 240 VAFHLCASHTIYVSLNVNAK 299
            AF LCASH  Y  + +N++
Sbjct: 60  AAFQLCASHVTYARMGLNSQ 79


>gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
 Frame = +3

Query: 102 MAER---FYIQELPSHLLIEILTSSAHLTATDLVSLEQTCQTI-----------RSIIEY 239
           M ER   F I+ELPSHL++EIL S   L+A DLV LE T +T            +S++ +
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAF 59

Query: 240 VAFHLCASHTIYVSLNVNAK 299
            AF LCASH  Y  + +N++
Sbjct: 60  AAFQLCASHVTYARMGLNSQ 79