BLASTX nr result

ID: Coptis21_contig00029441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029441
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853...    72   4e-11
ref|XP_002525915.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
gb|AFK48336.1| unknown [Lotus japonicus]                               66   3e-09
ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABD83303.1| Fgenesh protein 124 [Beta vulgaris]                     64   1e-08

>ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853072 [Vitis vinifera]
           gi|297737443|emb|CBI26644.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +1

Query: 187 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLG 309
           MENITASELAG GVGTLL CATIAAP+VD+FISASQR SLG
Sbjct: 1   MENITASELAGFGVGTLLLCATIAAPRVDSFISASQRRSLG 41


>ref|XP_002525915.1| conserved hypothetical protein [Ricinus communis]
           gi|223534744|gb|EEF36435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +1

Query: 187 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLG 309
           M NITASE+AGLGVG+LL C  IAAPK+D+FIS+SQR+SLG
Sbjct: 1   MNNITASEIAGLGVGSLLLCCAIAAPKIDSFISSSQRSSLG 41


>gb|AFK48336.1| unknown [Lotus japonicus]
          Length = 110

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +1

Query: 187 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLG 309
           M+NITASE+AGLGVG LL  ATIAAPK+DAF S+SQR+SLG
Sbjct: 1   MDNITASEIAGLGVGVLLLSATIAAPKIDAFFSSSQRSSLG 41


>ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|222873115|gb|EEF10246.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = +1

Query: 187 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLG 309
           M N+T+SE+AG GVG LL CATI+APK+D+FISASQR+SLG
Sbjct: 1   MNNLTSSEVAGFGVGALLLCATISAPKIDSFISASQRSSLG 41


>gb|ABD83303.1| Fgenesh protein 124 [Beta vulgaris]
          Length = 60

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +1

Query: 187 MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRT 300
           MENITASE+AG GVGT L CATIAAPKVDAFIS++Q++
Sbjct: 14  MENITASEIAGFGVGTFLLCATIAAPKVDAFISSAQKS 51


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