BLASTX nr result

ID: Coptis21_contig00029424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029424
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synth...   172   2e-41
emb|CBI15960.3| unnamed protein product [Vitis vinifera]              172   2e-41
emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]   171   4e-41
ref|NP_200685.1| dehydrodolichyl diphosphate synthase 2 [Arabido...   171   8e-41
ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arab...   170   1e-40

>ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Vitis
           vinifera]
          Length = 311

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/108 (74%), Positives = 95/108 (87%)
 Frame = -3

Query: 370 KNNLGLQLIVAVSYSGQYDIVQACQNIAHKVKEGSIEPESINECLIEQELETNCTKFPYP 191
           K N  LQ IVA+SYSGQ DI+QAC+NI +KVK+G IEPE IN+ LIEQEL+TNCT+FP+P
Sbjct: 194 KENSRLQFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFP 253

Query: 190 DLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIKALQSFQ 47
           DLLIRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF++AL SFQ
Sbjct: 254 DLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQ 301


>emb|CBI15960.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/108 (74%), Positives = 95/108 (87%)
 Frame = -3

Query: 370 KNNLGLQLIVAVSYSGQYDIVQACQNIAHKVKEGSIEPESINECLIEQELETNCTKFPYP 191
           K N  LQ IVA+SYSGQ DI+QAC+NI +KVK+G IEPE IN+ LIEQEL+TNCT+FP+P
Sbjct: 116 KENSRLQFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFP 175

Query: 190 DLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIKALQSFQ 47
           DLLIRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF++AL SFQ
Sbjct: 176 DLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQ 223


>emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
          Length = 592

 Score =  171 bits (434), Expect = 4e-41
 Identities = 80/108 (74%), Positives = 94/108 (87%)
 Frame = -3

Query: 370 KNNLGLQLIVAVSYSGQYDIVQACQNIAHKVKEGSIEPESINECLIEQELETNCTKFPYP 191
           K N  LQ IVA+SYSGQ DI+QAC+NI  KVK+G IEPE IN+ LIEQEL+TNCT+FP+P
Sbjct: 200 KENSRLQFIVALSYSGQCDILQACKNIGXKVKDGLIEPEDINKSLIEQELQTNCTEFPFP 259

Query: 190 DLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIKALQSFQ 47
           DLLIRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF++AL SFQ
Sbjct: 260 DLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQ 307


>ref|NP_200685.1| dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana]
           gi|85541788|sp|Q56Y11.2|DDPS2_ARATH RecName:
           Full=Dehydrodolichyl diphosphate synthase 2;
           Short=Dedol-PP synthase 2 gi|8843797|dbj|BAA97345.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|208879536|gb|ACI31313.1| At5g58770 [Arabidopsis
           thaliana] gi|332009713|gb|AED97096.1| dehydrodolichyl
           diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 310

 Score =  171 bits (432), Expect = 8e-41
 Identities = 82/108 (75%), Positives = 93/108 (86%)
 Frame = -3

Query: 370 KNNLGLQLIVAVSYSGQYDIVQACQNIAHKVKEGSIEPESINECLIEQELETNCTKFPYP 191
           KNN  LQLIVAV YSG+YD++QAC+ IA +VK+G IE E I+E LIE+ELETNCT+FPYP
Sbjct: 192 KNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPYP 251

Query: 190 DLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIKALQSFQ 47
           DLLIRTSGELRVSNFLLWQLAYTEL F Q LWPDFG + FI+AL SFQ
Sbjct: 252 DLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQ 299


>ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
           lyrata] gi|297310423|gb|EFH40847.1| hypothetical protein
           ARALYDRAFT_496002 [Arabidopsis lyrata subsp. lyrata]
          Length = 310

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/108 (75%), Positives = 93/108 (86%)
 Frame = -3

Query: 370 KNNLGLQLIVAVSYSGQYDIVQACQNIAHKVKEGSIEPESINECLIEQELETNCTKFPYP 191
           KNN  LQLIVAV YSG+YD++QAC+ IA +VK+G IE E I+E LIE+ELETNCT+FPYP
Sbjct: 192 KNNTRLQLIVAVGYSGKYDVLQACRGIAQRVKDGEIEVEEIDERLIEEELETNCTEFPYP 251

Query: 190 DLLIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIKALQSFQ 47
           DLLIRTSGELRVSNFLLWQLAYTEL F Q LWPDFG + FI+AL SFQ
Sbjct: 252 DLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALTSFQ 299


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