BLASTX nr result

ID: Coptis21_contig00029421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029421
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...   170   1e-40
emb|CBI23000.3| unnamed protein product [Vitis vinifera]              170   1e-40
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]   170   1e-40
ref|XP_004164710.1| PREDICTED: putative E3 ubiquitin-protein lig...   160   1e-37
ref|XP_004134218.1| PREDICTED: putative E3 ubiquitin-protein lig...   160   1e-37

>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1339

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/143 (60%), Positives = 101/143 (70%)
 Frame = -1

Query: 431  REEVVEVLLKAIXXXXXXXXXXXXXXXXSNLGGAYSSTGEPYTAAWLVKKIGLTSIHHKN 252
            REE +EVLL+++                SNLGG YS TGEPYT AWLVKK GLTS++H+N
Sbjct: 831  REEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRN 890

Query: 251  MIRNFDWSDESLQDGGTDAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAITW 72
            MIRNFDW D+SLQD GTD WCSK+ R II  G P+F AL KGLKSK++ VSR CL AI W
Sbjct: 891  MIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAW 950

Query: 71   LGCEITKIAPIDLRCTACEILLS 3
            LG EI    P +LR +ACEILLS
Sbjct: 951  LGYEIA-TTPNELRYSACEILLS 972


>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
          Length = 1274

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/143 (60%), Positives = 101/143 (70%)
 Frame = -1

Query: 431  REEVVEVLLKAIXXXXXXXXXXXXXXXXSNLGGAYSSTGEPYTAAWLVKKIGLTSIHHKN 252
            REE +EVLL+++                SNLGG YS TGEPYT AWLVKK GLTS++H+N
Sbjct: 766  REEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRN 825

Query: 251  MIRNFDWSDESLQDGGTDAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAITW 72
            MIRNFDW D+SLQD GTD WCSK+ R II  G P+F AL KGLKSK++ VSR CL AI W
Sbjct: 826  MIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAW 885

Query: 71   LGCEITKIAPIDLRCTACEILLS 3
            LG EI    P +LR +ACEILLS
Sbjct: 886  LGYEIA-TTPNELRYSACEILLS 907


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/143 (60%), Positives = 101/143 (70%)
 Frame = -1

Query: 431  REEVVEVLLKAIXXXXXXXXXXXXXXXXSNLGGAYSSTGEPYTAAWLVKKIGLTSIHHKN 252
            REE +EVLL+++                SNLGG YS TGEPYT AWLVKK GLTS++H+N
Sbjct: 831  REEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRN 890

Query: 251  MIRNFDWSDESLQDGGTDAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAITW 72
            MIRNFDW D+SLQD GTD WCSK+ R II  G P+F AL KGLKSK++ VSR CL AI W
Sbjct: 891  MIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAW 950

Query: 71   LGCEITKIAPIDLRCTACEILLS 3
            LG EI    P +LR +ACEILLS
Sbjct: 951  LGYEIA-TTPNELRYSACEILLS 972


>ref|XP_004164710.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like, partial
            [Cucumis sativus]
          Length = 1313

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/144 (55%), Positives = 102/144 (70%)
 Frame = -1

Query: 434  LREEVVEVLLKAIXXXXXXXXXXXXXXXXSNLGGAYSSTGEPYTAAWLVKKIGLTSIHHK 255
            L+EE V+VLL+++                S +GG ++ TGEPYT AWL+KK+GL+S  H+
Sbjct: 809  LKEEAVQVLLRSVTCEESSAMQLLSASILSTIGGTFAWTGEPYTVAWLLKKVGLSS-DHQ 867

Query: 254  NMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAIT 75
            NMI++ +W D+SLQD G D+WCS +AR II +GEPVF AL KGLKS IK VSR CL  I 
Sbjct: 868  NMIKSINWLDQSLQDAGMDSWCSLMARNIICIGEPVFHALEKGLKSDIKKVSRDCLTTIA 927

Query: 74   WLGCEITKIAPIDLRCTACEILLS 3
            WLGCEI K +P  +RC+ACEILLS
Sbjct: 928  WLGCEIAK-SPDSIRCSACEILLS 950


>ref|XP_004134218.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Cucumis
            sativus]
          Length = 1339

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/144 (55%), Positives = 102/144 (70%)
 Frame = -1

Query: 434  LREEVVEVLLKAIXXXXXXXXXXXXXXXXSNLGGAYSSTGEPYTAAWLVKKIGLTSIHHK 255
            L+EE V+VLL+++                S +GG ++ TGEPYT AWL+KK+GL+S  H+
Sbjct: 830  LKEEAVQVLLRSVTCEESSAMQLLSASILSTIGGTFAWTGEPYTVAWLLKKVGLSS-DHQ 888

Query: 254  NMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAIT 75
            NMI++ +W D+SLQD G D+WCS +AR II +GEPVF AL KGLKS IK VSR CL  I 
Sbjct: 889  NMIKSINWLDQSLQDAGMDSWCSLMARNIICIGEPVFHALEKGLKSDIKKVSRDCLTTIA 948

Query: 74   WLGCEITKIAPIDLRCTACEILLS 3
            WLGCEI K +P  +RC+ACEILLS
Sbjct: 949  WLGCEIAK-SPDSIRCSACEILLS 971