BLASTX nr result

ID: Coptis21_contig00029401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029401
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...   106   2e-21
ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-...   102   2e-20
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
emb|CAN81921.1| hypothetical protein VITISV_010334 [Vitis vinifera]   100   2e-19
ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 380

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/94 (59%), Positives = 67/94 (71%)
 Frame = -3

Query: 493 KTSKADVMSKDLLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGS 314
           KT KADV+SKDL+RRGFRSV  T++YSFMQV GLTNDHLI+CFRFQECIN     EE+G 
Sbjct: 294 KTPKADVISKDLVRRGFRSVGPTVVYSFMQVAGLTNDHLISCFRFQECINAAEGKEENGV 353

Query: 313 KMKDGSKMKVEERSKEMLNLGLARAMDDFSFSSE 212
           K++D     V E         ++ AMD+ SFSSE
Sbjct: 354 KVEDKITDGVVESQ-------ISIAMDELSFSSE 380


>ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Vitis
           vinifera] gi|297743642|emb|CBI36525.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/94 (55%), Positives = 68/94 (72%)
 Frame = -3

Query: 493 KTSKADVMSKDLLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGS 314
           KT KADV+SKDL+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQ+C+      EE+  
Sbjct: 288 KTPKADVISKDLVRRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQDCVTAAEVKEEE-- 345

Query: 313 KMKDGSKMKVEERSKEMLNLGLARAMDDFSFSSE 212
            +  G+    EE+   ++   L+RA+D+ SFSSE
Sbjct: 346 -ITTGA---AEEKKSNVIESELSRAIDELSFSSE 375


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/94 (53%), Positives = 68/94 (72%)
 Frame = -3

Query: 493 KTSKADVMSKDLLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGS 314
           KT KAD +SKDL+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQECI+     EE+G 
Sbjct: 295 KTPKADAISKDLVRRGFRSVGPTVIYSFMQVAGVTNDHLISCFRFQECIDAAEGKEENGI 354

Query: 313 KMKDGSKMKVEERSKEMLNLGLARAMDDFSFSSE 212
           K +D        ++ +++   ++ ++D+ SFSSE
Sbjct: 355 KSED-------VKTDDIMESKISISIDELSFSSE 381


>emb|CAN81921.1| hypothetical protein VITISV_010334 [Vitis vinifera]
          Length = 123

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/94 (56%), Positives = 69/94 (73%)
 Frame = -3

Query: 493 KTSKADVMSKDLLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGS 314
           KT KADV+SKDL+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQ+C+      EE+  
Sbjct: 37  KTPKADVISKDLVRRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQDCVTAAEVKEEE-- 94

Query: 313 KMKDGSKMKVEERSKEMLNLGLARAMDDFSFSSE 212
            +  G+    EE+S  ++   L+RA+D+ SFSSE
Sbjct: 95  -ITTGA---AEEKS-NVIESELSRAIDELSFSSE 123


>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/94 (52%), Positives = 67/94 (71%)
 Frame = -3

Query: 493 KTSKADVMSKDLLRRGFRSVSATIIYSFMQVTGLTNDHLITCFRFQECINPVGQNEEDGS 314
           KT KAD +SKDL+RRGFRSV  T+IYSFMQV G+TNDHLI+CFRFQEC++      E+G 
Sbjct: 294 KTPKADAISKDLVRRGFRSVGPTVIYSFMQVAGITNDHLISCFRFQECLDAAEGKVENGI 353

Query: 313 KMKDGSKMKVEERSKEMLNLGLARAMDDFSFSSE 212
           K +D        ++ +++   ++ A+D+ SFSSE
Sbjct: 354 KSED-------IKTNDVMESKISIAIDELSFSSE 380


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