BLASTX nr result

ID: Coptis21_contig00029371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029371
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137456.1| PREDICTED: serine/threonine-protein kinase 1...   103   2e-20
ref|XP_002269355.1| PREDICTED: probable serine/threonine-protein...   102   3e-20
emb|CAN66918.1| hypothetical protein VITISV_043041 [Vitis vinifera]   100   1e-19
ref|NP_196433.1| serine/threonine protein kinase 3 [Arabidopsis ...    99   5e-19
gb|AAM65833.1| serine/threonine protein kinase [Arabidopsis thal...    99   5e-19

>ref|XP_004137456.1| PREDICTED: serine/threonine-protein kinase 16-like [Cucumis
           sativus] gi|449486881|ref|XP_004157430.1| PREDICTED:
           serine/threonine-protein kinase 16-like [Cucumis
           sativus] gi|56605380|emb|CAI30891.1| somatic
           embryogenesis serine-threonine protein kinase 1 [Cucumis
           sativus]
          Length = 344

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/71 (71%), Positives = 58/71 (81%), Gaps = 4/71 (5%)
 Frame = +3

Query: 21  MGCSFSGLNALYDAVNGGEDVWINENRYRILRQLGEGGFAFVFLVQQVAXXXXXXAG--- 191
           MGCSFSGLNALYDAVNGG DVWINENR+RI+RQLGEGGFAFVFLV++V       +G   
Sbjct: 1   MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVFLVKEVVSDSSSPSGGGL 60

Query: 192 -KKLRDPSLIS 221
            KKL+DPS +S
Sbjct: 61  AKKLKDPSRLS 71


>ref|XP_002269355.1| PREDICTED: probable serine/threonine-protein kinase DDB_G0291350
           isoform 1 [Vitis vinifera] gi|297734124|emb|CBI15371.3|
           unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  102 bits (255), Expect = 3e-20
 Identities = 48/67 (71%), Positives = 55/67 (82%)
 Frame = +3

Query: 21  MGCSFSGLNALYDAVNGGEDVWINENRYRILRQLGEGGFAFVFLVQQVAXXXXXXAGKKL 200
           MGCSFSGLNALYDAVNGG DVWINENR+RI+R LGEGGFA+VFLV++V       A KK 
Sbjct: 1   MGCSFSGLNALYDAVNGGGDVWINENRFRIVRPLGEGGFAYVFLVKEVVTDSSSSASKKF 60

Query: 201 RDPSLIS 221
           +DPS +S
Sbjct: 61  KDPSHVS 67


>emb|CAN66918.1| hypothetical protein VITISV_043041 [Vitis vinifera]
          Length = 341

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = +3

Query: 21  MGCSFSGLNALYDAVNGGEDVWINENRYRILRQLGEGGFAFVFLVQQVAXXXXXXAGKKL 200
           MGCSFSGLNALYDAVNGG DVWINENR+ I+R LGEGGFA+VFLV++V       A KK 
Sbjct: 1   MGCSFSGLNALYDAVNGGGDVWINENRFXIVRPLGEGGFAYVFLVKEVVTDSSSSASKKF 60

Query: 201 RDPSLIS 221
           +DPS +S
Sbjct: 61  KDPSHVS 67


>ref|NP_196433.1| serine/threonine protein kinase 3 [Arabidopsis thaliana]
           gi|11762274|gb|AAG40409.1|AF325057_1 AT5g08160
           [Arabidopsis thaliana] gi|2109293|gb|AAB69123.1|
           serine/threonine protein kinase [Arabidopsis thaliana]
           gi|8346553|emb|CAB93717.1| serine/threonine protein
           kinase [Arabidopsis thaliana] gi|24417498|gb|AAN60359.1|
           unknown [Arabidopsis thaliana]
           gi|94442405|gb|ABF18990.1| At5g08160 [Arabidopsis
           thaliana] gi|332003876|gb|AED91259.1| serine/threonine
           protein kinase 3 [Arabidopsis thaliana]
          Length = 347

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 5/72 (6%)
 Frame = +3

Query: 21  MGCSFSGLNALYDAVNGGEDVWINENRYRILRQLGEGGFAFVFLVQQVAXXXXXXA---- 188
           MGCSFSGLNALYDAVNGG DVWINENR+RI+RQLGEGGFAFVFLV+++       A    
Sbjct: 1   MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVFLVKEIVADASSAASGGG 60

Query: 189 -GKKLRDPSLIS 221
             KK++DP+ +S
Sbjct: 61  LAKKVKDPAHLS 72


>gb|AAM65833.1| serine/threonine protein kinase [Arabidopsis thaliana]
          Length = 347

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 5/72 (6%)
 Frame = +3

Query: 21  MGCSFSGLNALYDAVNGGEDVWINENRYRILRQLGEGGFAFVFLVQQVAXXXXXXA---- 188
           MGCSFSGLNALYDAVNGG DVWINENR+RI+RQLGEGGFAFVFLV+++       A    
Sbjct: 1   MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVFLVKEIVADASSAASGGG 60

Query: 189 -GKKLRDPSLIS 221
             KK++DP+ +S
Sbjct: 61  LAKKVKDPAHLS 72


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