BLASTX nr result

ID: Coptis21_contig00029360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029360
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|...   196   2e-48
emb|CBI29278.3| unnamed protein product [Vitis vinifera]              191   4e-47
ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthe...   191   4e-47
emb|CAN78161.1| hypothetical protein VITISV_040921 [Vitis vinifera]   191   4e-47
ref|XP_002303740.1| GH3 family protein [Populus trichocarpa] gi|...   189   2e-46

>ref|XP_002299361.1| GH3 family protein [Populus trichocarpa]
           gi|222846619|gb|EEE84166.1| GH3 family protein [Populus
           trichocarpa]
          Length = 606

 Score =  196 bits (497), Expect = 2e-48
 Identities = 93/117 (79%), Positives = 104/117 (88%)
 Frame = +1

Query: 1   DTDKTNEDDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSE 180
           DTDKTNE+DLL AVTQAK+LLE L  +LTEYTS+ DT+SIPGHYVLFWELKMRG  +L E
Sbjct: 448 DTDKTNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTASIPGHYVLFWELKMRGTNDLPE 507

Query: 181 LNTTVMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSS 351
           L+  +ME+CC+IVEESLD VYRRCR KDKSIGPLE+RVV HGTFDALMDFCVSQGSS
Sbjct: 508 LDPVIMEQCCSIVEESLDSVYRRCRKKDKSIGPLEVRVVTHGTFDALMDFCVSQGSS 564


>emb|CBI29278.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/117 (79%), Positives = 102/117 (87%)
 Frame = +1

Query: 1   DTDKTNEDDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSE 180
           DTDKTNE+DLL AVTQAKLLLE    +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE
Sbjct: 336 DTDKTNEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSE 395

Query: 181 LNTTVMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSS 351
            + T+ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSS
Sbjct: 396 PDHTIMEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSS 452


>ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like [Vitis
           vinifera]
          Length = 607

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/117 (79%), Positives = 102/117 (87%)
 Frame = +1

Query: 1   DTDKTNEDDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSE 180
           DTDKTNE+DLL AVTQAKLLLE    +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE
Sbjct: 448 DTDKTNEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSE 507

Query: 181 LNTTVMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSS 351
            + T+ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSS
Sbjct: 508 PDHTIMEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSS 564


>emb|CAN78161.1| hypothetical protein VITISV_040921 [Vitis vinifera]
          Length = 676

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/117 (79%), Positives = 102/117 (87%)
 Frame = +1

Query: 1   DTDKTNEDDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSE 180
           DTDKTNE+DLL AVTQAKLLLE    +LTEYTSY DTSSIPGHYVLFWELK RGN +LSE
Sbjct: 471 DTDKTNEEDLLKAVTQAKLLLEPYGFLLTEYTSYADTSSIPGHYVLFWELKTRGNNDLSE 530

Query: 181 LNTTVMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSS 351
            + T+ME+CC+ VEESLD VYRRCR +D SIGPLEIR+VK GTFDALMDFCVSQGSS
Sbjct: 531 PDHTIMEQCCSTVEESLDSVYRRCRRRDNSIGPLEIRIVKPGTFDALMDFCVSQGSS 587


>ref|XP_002303740.1| GH3 family protein [Populus trichocarpa]
           gi|222841172|gb|EEE78719.1| GH3 family protein [Populus
           trichocarpa]
          Length = 587

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/117 (77%), Positives = 101/117 (86%)
 Frame = +1

Query: 1   DTDKTNEDDLLNAVTQAKLLLESLRCILTEYTSYPDTSSIPGHYVLFWELKMRGNGELSE 180
           DTDKTNE+DLL AVTQAK+LLE L  +LTEYTS+ DTSSIPGHYVLFWELK +G  +L E
Sbjct: 435 DTDKTNEEDLLKAVTQAKVLLEPLGFLLTEYTSFADTSSIPGHYVLFWELKTQGTNDLPE 494

Query: 181 LNTTVMEECCNIVEESLDYVYRRCRSKDKSIGPLEIRVVKHGTFDALMDFCVSQGSS 351
           L+   ME+CC+ VEESLD +YRRCR KDKSIGPLEIRVV HGTFDALMDFCVSQGSS
Sbjct: 495 LDPITMEKCCSTVEESLDSIYRRCRKKDKSIGPLEIRVVTHGTFDALMDFCVSQGSS 551


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