BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029345
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]    82   3e-14
ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,...    78   7e-13
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13

>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/78 (48%), Positives = 52/78 (66%)
 Frame = +2

Query: 5   LGLVHLGEYVFDEMCKRGVSPNSCSFNVMIGGQCRAGSGVSEVERWLKAMFEKGYFLDNV 184
           +GLV + E +F EMC+RGVSP+  SF +M+   C  G  V E ERWL AM E+G+ +DN 
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR-VLEAERWLNAMVERGFIVDNA 260

Query: 185 ECTLVVDFFCKMGCAGKV 238
            CTL++D FC+ G   +V
Sbjct: 261 TCTLIIDAFCQKGYVNRV 278


>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = +2

Query: 5   LGLVHLGEYVFDEMCKRGVSPNSCSFNVMIGGQCRAGSGVSEVERWLKAMFEKGYFLDNV 184
           +GLV + E +F EMC+RGVSP+  SF +M+   C  G  V E E+WL AM E+G+ +DN 
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR-VLEAEKWLNAMVERGFIVDNA 260

Query: 185 ECTLVVDFFCKMGCAGKV 238
            CTL++D FC+ G   +V
Sbjct: 261 TCTLIIDAFCQKGYVNRV 278


>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +2

Query: 2   ELGLVHLGEYVFDEMCKRGVSPNSCSFNVMIGGQCRAGSGVSEVERWLKAMFEKGYFLDN 181
           E+GLV   E VFDEM  RGV P+S S+ +M    CR G  +S+ +RWLK M  +G+ +DN
Sbjct: 208 EMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGR-ISDTDRWLKDMVRRGFVVDN 266

Query: 182 VECTLVVDFFCKMGCAGKVF 241
             CTL++  FC+ G A +VF
Sbjct: 267 ATCTLMISTFCEKGFASRVF 286


>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 712

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/79 (46%), Positives = 50/79 (63%)
 Frame = +2

Query: 5   LGLVHLGEYVFDEMCKRGVSPNSCSFNVMIGGQCRAGSGVSEVERWLKAMFEKGYFLDNV 184
           LG V   E VFDEM  R V P+S S+ +M+ G CR G  +S+V+RWLK M E+GY +DN 
Sbjct: 206 LGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGR-ISDVDRWLKDMIERGYAVDNA 264

Query: 185 ECTLVVDFFCKMGCAGKVF 241
            CTL++  F + G   + F
Sbjct: 265 TCTLMISTFSEKGFVNRAF 283


>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/74 (48%), Positives = 49/74 (66%)
 Frame = +2

Query: 2   ELGLVHLGEYVFDEMCKRGVSPNSCSFNVMIGGQCRAGSGVSEVERWLKAMFEKGYFLDN 181
           E+GLV   E +FDEMC RGV PN  S+ VM+ G C+ G+ V E +RWL  M E+G+ +DN
Sbjct: 179 EMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGN-VLESDRWLGGMIERGFVVDN 237

Query: 182 VECTLVVDFFCKMG 223
              +L+V  FC+ G
Sbjct: 238 ATLSLIVREFCEKG 251