BLASTX nr result

ID: Coptis21_contig00029343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029343
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514872.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|XP_002300123.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
emb|CBI21322.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002264994.2| PREDICTED: uncharacterized protein LOC100254...   128   4e-28
emb|CBI38156.3| unnamed protein product [Vitis vinifera]              128   4e-28

>ref|XP_002514872.1| conserved hypothetical protein [Ricinus communis]
           gi|223545923|gb|EEF47426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1590

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 24/155 (15%)
 Frame = +3

Query: 3   LSPQWLYAKPSETKTGLSSAPG---------------------DKKERNRVVTENESSRH 119
           LSPQWLY+KPSETK  + +                        DKK+  R+ TENESSR 
Sbjct: 56  LSPQWLYSKPSETKMDMRTLTSVALGNTNDASQKEGWRLDGTDDKKDWRRIATENESSRR 115

Query: 120 WHEEERDTGILG-QRDCTEEDRHADNDSNKESAEGRGSTSADRWNDAANCSSGLETRREG 296
           W EEER+TG+LG +RD  + +R  D+ S +E+ E R   S++RW+D  N +SG E RR+ 
Sbjct: 116 WREEERETGLLGARRDRRKTERRVDSVSIRETMENRVLPSSERWHDGTNRNSGHEARRDS 175

Query: 297 RWSTRWGPDDKEKDSRSETR--ISAEKEDSLNDNK 395
           +WS+RWGPDDKEKDSR+E R  +  EKED  NDN+
Sbjct: 176 KWSSRWGPDDKEKDSRAERRTDVDKEKEDVHNDNQ 210


>ref|XP_002300123.1| predicted protein [Populus trichocarpa] gi|222847381|gb|EEE84928.1|
           predicted protein [Populus trichocarpa]
          Length = 1697

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 28/159 (17%)
 Frame = +3

Query: 3   LSPQWLYAKPSETKTGLSSAPG----------------------------DKKERNRVVT 98
           LSPQWLYAKP + K+  + A G                            DKK+R R+  
Sbjct: 57  LSPQWLYAKPVDAKSLTTGASGETRASNSLSHGNSIDNNLKDNWRLDGSQDKKDRRRIAP 116

Query: 99  ENESSRHWHEEERDTGILGQRDCTEEDRHADNDSNKESAEGRGSTSADRWNDAANCSSGL 278
           + ESSR W EEERDTG+LG++D  +ED  AD+ S ++ +E R  +S+DRW+D  + +S  
Sbjct: 117 DVESSRRWREEERDTGLLGRKDRRKEDNRADSVSARDISETRTLSSSDRWHDGNSRNSAH 176

Query: 279 ETRREGRWSTRWGPDDKEKDSRSETRISAEKEDSLNDNK 395
           E+RR+ +WS+RWGP+DKEKDSR++ R   EK+D+ +D +
Sbjct: 177 ESRRDSKWSSRWGPEDKEKDSRTDKRADVEKDDAHSDKQ 215


>emb|CBI21322.3| unnamed protein product [Vitis vinifera]
          Length = 1665

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/153 (46%), Positives = 88/153 (57%), Gaps = 28/153 (18%)
 Frame = +3

Query: 3   LSPQWLYAKPSETKTGLSSAPG----------------------------DKKERNRVVT 98
           LSPQWLYAKP E K  +    G                            DKK+  R   
Sbjct: 57  LSPQWLYAKPVEAKILIGGTSGEMRAPNPIPHGNSTDPNQKDGWRLDGSQDKKDWRRTAA 116

Query: 99  ENESSRHWHEEERDTGILGQRDCTEEDRHADNDSNKESAEGRGSTSADRWNDAANCSSGL 278
           + ESSR W EEER+TG+LG+RD  +E+R AD    +E+AE R  TS+DRW+D  N SS  
Sbjct: 117 DIESSRRWREEERETGLLGRRDRRKEERRADVIPTRETAESRALTSSDRWHD-NNRSSVH 175

Query: 279 ETRREGRWSTRWGPDDKEKDSRSETRISAEKED 377
           E RR+ +WS+RWGP+DKEKDSR+E R   EKED
Sbjct: 176 EPRRDNKWSSRWGPEDKEKDSRTEKRTDVEKED 208


>ref|XP_002264994.2| PREDICTED: uncharacterized protein LOC100254102 [Vitis vinifera]
          Length = 1593

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 22/153 (14%)
 Frame = +3

Query: 3   LSPQWLYAKPSETKT----------GLSSAPG-----------DKKERNRVVTENESSRH 119
           LSPQWLY+KP+ETK           G S+ P            DKK+  ++ T+ ES+R 
Sbjct: 32  LSPQWLYSKPNETKMETRAPNSAALGNSTDPNQKEGWRLDASEDKKDWRKIATDTESNRR 91

Query: 120 WHEEERDTGILG-QRDCTEEDRHADNDSNKESAEGRGSTSADRWNDAANCSSGLETRREG 296
           W EEER+TG+LG +R+  + DR  D  S +ES + R   +++RW+D +N +S  ETRR+ 
Sbjct: 92  WREEERETGLLGGRRNLRKVDRRVDTVSIRESIDSRALPTSERWHDGSNRNSVHETRRDS 151

Query: 297 RWSTRWGPDDKEKDSRSETRISAEKEDSLNDNK 395
           +WS+RWGP+++EK+SR+E R   +KED+ +DN+
Sbjct: 152 KWSSRWGPEEREKESRTEKRPDVDKEDAHSDNQ 184


>emb|CBI38156.3| unnamed protein product [Vitis vinifera]
          Length = 946

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 22/153 (14%)
 Frame = +3

Query: 3   LSPQWLYAKPSETKT----------GLSSAPG-----------DKKERNRVVTENESSRH 119
           LSPQWLY+KP+ETK           G S+ P            DKK+  ++ T+ ES+R 
Sbjct: 57  LSPQWLYSKPNETKMETRAPNSAALGNSTDPNQKEGWRLDASEDKKDWRKIATDTESNRR 116

Query: 120 WHEEERDTGILG-QRDCTEEDRHADNDSNKESAEGRGSTSADRWNDAANCSSGLETRREG 296
           W EEER+TG+LG +R+  + DR  D  S +ES + R   +++RW+D +N +S  ETRR+ 
Sbjct: 117 WREEERETGLLGGRRNLRKVDRRVDTVSIRESIDSRALPTSERWHDGSNRNSVHETRRDS 176

Query: 297 RWSTRWGPDDKEKDSRSETRISAEKEDSLNDNK 395
           +WS+RWGP+++EK+SR+E R   +KED+ +DN+
Sbjct: 177 KWSSRWGPEEREKESRTEKRPDVDKEDAHSDNQ 209