BLASTX nr result

ID: Coptis21_contig00029331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029331
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002513451.1| transcription factor, putative [Ricinus comm...   119   3e-25
ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-lik...   113   2e-23
ref|NP_001030733.1| transcription factor jumonji (jmjC) domain-c...   112   3e-23
ref|NP_566667.1| transcription factor jumonji (jmjC) domain-cont...   112   3e-23

>ref|XP_002299244.1| predicted protein [Populus trichocarpa] gi|222846502|gb|EEE84049.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 52  NQLPTPILNTIRSNLLEQITNEGGYSYVSIATRGAQGDHKAAEVGREMAWEQLHSGPWHS 231
           N L TP L+   SNLL+ I++ GGY+YVS++T  A GD +AAE  REMAWEQLHSGPWHS
Sbjct: 12  NYLTTPTLDAESSNLLQTISSHGGYAYVSMSTLAASGDFRAAEAAREMAWEQLHSGPWHS 71

Query: 232 VLPLWRDAYSMSCLQVASFYYRNG 303
           VLP WRDAYSM+CL VA F+YRNG
Sbjct: 72  VLPAWRDAYSMACLHVAKFHYRNG 95


>ref|XP_002513451.1| transcription factor, putative [Ricinus communis]
           gi|223547359|gb|EEF48854.1| transcription factor,
           putative [Ricinus communis]
          Length = 416

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +1

Query: 49  TNQLPTPILNTIRSNLLEQITNEGGYSYVSIATRGAQGDHKAAEVGREMAWEQLHSGPWH 228
           T+ L TP+L+    NLL+ I++ GGY+YV +AT  A G+ +AAE  REMAWEQLH GPWH
Sbjct: 8   TDHLSTPLLDAESPNLLQSISSHGGYAYVRMATLAASGNFRAAEAAREMAWEQLHCGPWH 67

Query: 229 SVLPLWRDAYSMSCLQVASFYYRNG 303
           SV P+WRDAYSM+CL VA F+Y+NG
Sbjct: 68  SVSPVWRDAYSMACLHVAKFHYQNG 92


>ref|XP_003632166.1| PREDICTED: lysine-specific demethylase 8-like [Vitis vinifera]
          Length = 411

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/82 (63%), Positives = 64/82 (78%)
 Frame = +1

Query: 58  LPTPILNTIRSNLLEQITNEGGYSYVSIATRGAQGDHKAAEVGREMAWEQLHSGPWHSVL 237
           L TP L++   NLL QI+ +GGY+YVS++   A GD +AAE  REMAWEQLHSGPWHSVL
Sbjct: 14  LETPTLDSESPNLLLQISEQGGYAYVSMSVLAAAGDLRAAEATREMAWEQLHSGPWHSVL 73

Query: 238 PLWRDAYSMSCLQVASFYYRNG 303
           P+WRDAYSM+CL VA  ++R G
Sbjct: 74  PVWRDAYSMACLYVAKLHHRAG 95


>ref|NP_001030733.1| transcription factor jumonji (jmjC) domain-containing protein
           [Arabidopsis thaliana] gi|332642906|gb|AEE76427.1|
           transcription factor jumonji (jmjC) domain-containing
           protein [Arabidopsis thaliana]
          Length = 398

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/90 (54%), Positives = 62/90 (68%)
 Frame = +1

Query: 34  AAEHKTNQLPTPILNTIRSNLLEQITNEGGYSYVSIATRGAQGDHKAAEVGREMAWEQLH 213
           + +H   +LPTP L+     LL+ I+ EGGY+Y  +A     GD  AAE  R+MAWEQLH
Sbjct: 9   SGDHNNLRLPTPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMAWEQLH 68

Query: 214 SGPWHSVLPLWRDAYSMSCLQVASFYYRNG 303
           SGPWHSVLP+WRDAYSM+CL VA  ++  G
Sbjct: 69  SGPWHSVLPVWRDAYSMACLHVAKIHFAAG 98


>ref|NP_566667.1| transcription factor jumonji (jmjC) domain-containing protein
           [Arabidopsis thaliana] gi|9294408|dbj|BAB02489.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|21536708|gb|AAM61040.1| unknown [Arabidopsis
           thaliana] gi|332642905|gb|AEE76426.1| transcription
           factor jumonji (jmjC) domain-containing protein
           [Arabidopsis thaliana]
          Length = 418

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/90 (54%), Positives = 62/90 (68%)
 Frame = +1

Query: 34  AAEHKTNQLPTPILNTIRSNLLEQITNEGGYSYVSIATRGAQGDHKAAEVGREMAWEQLH 213
           + +H   +LPTP L+     LL+ I+ EGGY+Y  +A     GD  AAE  R+MAWEQLH
Sbjct: 9   SGDHNNLRLPTPTLDAESQTLLQSISAEGGYAYARMAVLAVAGDQSAAEAARDMAWEQLH 68

Query: 214 SGPWHSVLPLWRDAYSMSCLQVASFYYRNG 303
           SGPWHSVLP+WRDAYSM+CL VA  ++  G
Sbjct: 69  SGPWHSVLPVWRDAYSMACLHVAKIHFAAG 98


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