BLASTX nr result

ID: Coptis21_contig00029323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029323
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616084.1| Cohesin loading complex subunit SCC4-like pr...    99   2e-23
gb|AGG38120.1| maternal effect uncoordination 2-1 protein [Dimoc...    86   5e-20
gb|AGG38121.1| maternal effect uncoordination 2-2 protein [Dimoc...    86   5e-20
ref|XP_004164612.1| PREDICTED: uncharacterized protein LOC101227...    99   4e-19
ref|XP_004146189.1| PREDICTED: uncharacterized protein LOC101207...    99   4e-19

>ref|XP_003616084.1| Cohesin loading complex subunit SCC4-like protein [Medicago
           truncatula] gi|355517419|gb|AES99042.1| Cohesin loading
           complex subunit SCC4-like protein [Medicago truncatula]
          Length = 728

 Score = 99.4 bits (246), Expect(2) = 2e-23
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +1

Query: 79  EIYYPELQMFFATSVLHVHVIQWGDTNAVESALQRCTEVWELISPDRKQQCHGLFLYNEL 258
           E+ YPELQMFFATS+LH H++QW D N VE A+ +C E+WE I PD++QQC GL  YNEL
Sbjct: 166 EVRYPELQMFFATSLLHAHLMQWDDDNLVEQAVNKCNEIWESIQPDKRQQCPGLLFYNEL 225

Query: 259 LHTF 270
           LH F
Sbjct: 226 LHIF 229



 Score = 34.3 bits (77), Expect(2) = 2e-23
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +2

Query: 2   NFFAQLGNALVIEGDYTSSVDVLERG 79
           NF +QL NAL IEGDY  S+  LE G
Sbjct: 135 NFNSQLANALSIEGDYRGSISALECG 160


>gb|AGG38120.1| maternal effect uncoordination 2-1 protein [Dimocarpus longan]
          Length = 722

 Score = 85.9 bits (211), Expect(2) = 5e-20
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = +1

Query: 79  EIYYPELQMFFATSVLHVHVIQWGDTNAVESALQRCTEVWELISPDRKQQCHGLFLYNEL 258
           EI YP+LQ+FFATS+LHVH++QW D N + +A+ +C  +WE I P+R+ Q  GL  YNEL
Sbjct: 162 EISYPDLQLFFATSILHVHLMQWEDENLIANAINQCDLIWESIDPNRRGQLLGLLFYNEL 221

Query: 259 LHTF 270
           LH F
Sbjct: 222 LHMF 225



 Score = 36.6 bits (83), Expect(2) = 5e-20
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +2

Query: 2   NFFAQLGNALVIEGDYTSSVDVLERG 79
           NF +QL NAL+IEGDY +SV  L+ G
Sbjct: 131 NFNSQLANALIIEGDYQNSVSALQAG 156


>gb|AGG38121.1| maternal effect uncoordination 2-2 protein [Dimocarpus longan]
          Length = 692

 Score = 85.9 bits (211), Expect(2) = 5e-20
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = +1

Query: 79  EIYYPELQMFFATSVLHVHVIQWGDTNAVESALQRCTEVWELISPDRKQQCHGLFLYNEL 258
           EI YP+LQ+FFATS+LHVH++QW D N + +A+ +C  +WE I P+R+ Q  GL  YNEL
Sbjct: 162 EISYPDLQLFFATSILHVHLMQWEDENLIANAINQCDLIWESIDPNRRGQLLGLLFYNEL 221

Query: 259 LHTF 270
           LH F
Sbjct: 222 LHMF 225



 Score = 36.6 bits (83), Expect(2) = 5e-20
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +2

Query: 2   NFFAQLGNALVIEGDYTSSVDVLERG 79
           NF +QL NAL+IEGDY +SV  L+ G
Sbjct: 131 NFNSQLANALIIEGDYQNSVSALQAG 156


>ref|XP_004164612.1| PREDICTED: uncharacterized protein LOC101227912 [Cucumis sativus]
          Length = 580

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +1

Query: 79  EIYYPELQMFFATSVLHVHVIQWGDTNAVESALQRCTEVWELISPDRKQQCHGLFLYNEL 258
           EI YPELQMFFATS+LHVH++QW D N+V+ A+ +C EVWE I P+++QQC GL  YNEL
Sbjct: 162 EICYPELQMFFATSILHVHLMQWYDDNSVQQAVNKCDEVWESIEPEKRQQCVGLLFYNEL 221

Query: 259 LHTF 270
           LH F
Sbjct: 222 LHIF 225


>ref|XP_004146189.1| PREDICTED: uncharacterized protein LOC101207429 [Cucumis sativus]
          Length = 718

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +1

Query: 79  EIYYPELQMFFATSVLHVHVIQWGDTNAVESALQRCTEVWELISPDRKQQCHGLFLYNEL 258
           EI YPELQMFFATS+LHVH++QW D N+V+ A+ +C EVWE I P+++QQC GL  YNEL
Sbjct: 162 EICYPELQMFFATSILHVHLMQWYDDNSVQQAVNKCDEVWESIEPEKRQQCVGLLFYNEL 221

Query: 259 LHTF 270
           LH F
Sbjct: 222 LHIF 225


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