BLASTX nr result

ID: Coptis21_contig00029309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029309
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus c...   269   2e-70
gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]          265   4e-69
ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis ...   265   4e-69
ref|XP_004173744.1| PREDICTED: probable pectate lyase 12-like, p...   261   3e-68
ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [C...   261   3e-68

>ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223541323|gb|EEF42874.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 483

 Score =  269 bits (687), Expect = 2e-70
 Identities = 129/177 (72%), Positives = 141/177 (79%)
 Frame = -2

Query: 533 IVFSGNMLITLKEELIMNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSP 354
           IVF  NMLI LKEELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HCV S 
Sbjct: 139 IVFPSNMLIKLKEELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSG 198

Query: 353 VANVRSSTTHYGRRTKXXXXXXXXXXXSNIWIDHCSLSYCTDGLIDAIMGSSRITISNNY 174
             NVRSS THYG RTK            +IWIDHCSLS+C DGLIDA+MGS+ ITISNN+
Sbjct: 199 DTNVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNF 258

Query: 173 FSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 3
           FSHH+EVMLLGHSD+Y+PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFTQW
Sbjct: 259 FSHHNEVMLLGHSDEYLPDSGMQVTIAFNHFGEKLVQRMPRCRRGYIHVVNNDFTQW 315


>gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]
          Length = 489

 Score =  265 bits (676), Expect = 4e-69
 Identities = 127/177 (71%), Positives = 140/177 (79%)
 Frame = -2

Query: 533 IVFSGNMLITLKEELIMNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSP 354
           IVF+ NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HCV S 
Sbjct: 160 IVFATNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSG 219

Query: 353 VANVRSSTTHYGRRTKXXXXXXXXXXXSNIWIDHCSLSYCTDGLIDAIMGSSRITISNNY 174
            ANVRSS THYG RT             +IWIDHCSLS+C DGLIDA+MGS+ ITISNN+
Sbjct: 220 EANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNF 279

Query: 173 FSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 3
           FSHHDEVMLLGHSD Y+PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W
Sbjct: 280 FSHHDEVMLLGHSDSYVPDSGMQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRW 336


>ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
          Length = 583

 Score =  265 bits (676), Expect = 4e-69
 Identities = 127/177 (71%), Positives = 140/177 (79%)
 Frame = -2

Query: 533 IVFSGNMLITLKEELIMNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSP 354
           IVF+ NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HCV S 
Sbjct: 254 IVFATNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSG 313

Query: 353 VANVRSSTTHYGRRTKXXXXXXXXXXXSNIWIDHCSLSYCTDGLIDAIMGSSRITISNNY 174
            ANVRSS THYG RT             +IWIDHCSLS+C DGLIDA+MGS+ ITISNN+
Sbjct: 314 EANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNF 373

Query: 173 FSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 3
           FSHHDEVMLLGHSD Y+PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W
Sbjct: 374 FSHHDEVMLLGHSDSYVPDSGMQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRW 430


>ref|XP_004173744.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis
           sativus]
          Length = 430

 Score =  261 bits (668), Expect = 3e-68
 Identities = 127/177 (71%), Positives = 137/177 (77%)
 Frame = -2

Query: 533 IVFSGNMLITLKEELIMNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSP 354
           IVF  NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HC PS 
Sbjct: 96  IVFPANMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCHPSG 155

Query: 353 VANVRSSTTHYGRRTKXXXXXXXXXXXSNIWIDHCSLSYCTDGLIDAIMGSSRITISNNY 174
              VRSS THYG RTK            +IWIDHCSLS+C DGLIDA+MGS+ ITISNNY
Sbjct: 156 NTMVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNY 215

Query: 173 FSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 3
           FSHHDEVMLLGHSD+Y PDSGMQVTIAFNHFGE L+QRMPRCR GY HVVNNDFTQW
Sbjct: 216 FSHHDEVMLLGHSDNYWPDSGMQVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQW 272


>ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 480

 Score =  261 bits (668), Expect = 3e-68
 Identities = 127/177 (71%), Positives = 137/177 (77%)
 Frame = -2

Query: 533 IVFSGNMLITLKEELIMNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSP 354
           IVF  NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HC PS 
Sbjct: 146 IVFPANMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCHPSG 205

Query: 353 VANVRSSTTHYGRRTKXXXXXXXXXXXSNIWIDHCSLSYCTDGLIDAIMGSSRITISNNY 174
              VRSS THYG RTK            +IWIDHCSLS+C DGLIDA+MGS+ ITISNNY
Sbjct: 206 NTMVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNY 265

Query: 173 FSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 3
           FSHHDEVMLLGHSD+Y PDSGMQVTIAFNHFGE L+QRMPRCR GY HVVNNDFTQW
Sbjct: 266 FSHHDEVMLLGHSDNYWPDSGMQVTIAFNHFGEKLVQRMPRCRLGYIHVVNNDFTQW 322


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