BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029305
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing pro...   157   9e-37
emb|CBI22633.3| unnamed protein product [Vitis vinifera]              157   9e-37
ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008...   153   1e-35
ref|XP_003563145.1| PREDICTED: coiled-coil domain-containing pro...   153   2e-35
ref|XP_002513641.1| conserved hypothetical protein [Ricinus comm...   152   4e-35

>ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing protein 111 homolog [Vitis
           vinifera]
          Length = 632

 Score =  157 bits (397), Expect = 9e-37
 Identities = 69/104 (66%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -1

Query: 342 TYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVYNMLRNRYCERIGRQHKS 163
           T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY L+VY+M RNRYCERIGRQHKS
Sbjct: 430 TCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVYSMSRNRYCERIGRQHKS 489

Query: 162 NHVMYVIDFKRTVYYQKCYDPDCKG-STTAKPVLICILVPSFIL 34
           NHV+YV+D +R ++YQKC+DPDC+G  + ++P+ + ++  + +L
Sbjct: 490 NHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAVL 533


>emb|CBI22633.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  157 bits (397), Expect = 9e-37
 Identities = 69/104 (66%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -1

Query: 342 TYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVYNMLRNRYCERIGRQHKS 163
           T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY L+VY+M RNRYCERIGRQHKS
Sbjct: 404 TCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVYSMSRNRYCERIGRQHKS 463

Query: 162 NHVMYVIDFKRTVYYQKCYDPDCKG-STTAKPVLICILVPSFIL 34
           NHV+YV+D +R ++YQKC+DPDC+G  + ++P+ + ++  + +L
Sbjct: 464 NHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAVL 507


>ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008880|gb|AED96263.1| DNA
           primase [Arabidopsis thaliana]
          Length = 614

 Score =  153 bits (387), Expect = 1e-35
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = -1

Query: 345 TTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVYNMLRNRYCERIGRQHK 166
           T+YF GKSPFP LD F+ES AS GNV G+IR WYWFSE GLIVY+MLRNRYCERIGR+HK
Sbjct: 421 TSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVYSMLRNRYCERIGREHK 480

Query: 165 SNHVMYVIDFKRTVYYQKCYDPDCK 91
           SNHVMY++D +R +YYQKCYDPDC+
Sbjct: 481 SNHVMYIVDLRRGIYYQKCYDPDCR 505


>ref|XP_003563145.1| PREDICTED: coiled-coil domain-containing protein 111 homolog
           [Brachypodium distachyon]
          Length = 606

 Score =  153 bits (386), Expect = 2e-35
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = -1

Query: 348 PTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVYNMLRNRYCERIGRQH 169
           P  Y  G+SPFPALD F+ESIAS GNVSG+IRSWYWFSEYGL++Y+M ++RYCE IGR+H
Sbjct: 404 PHAYTYGRSPFPALDGFIESIASFGNVSGKIRSWYWFSEYGLMIYSMSKSRYCEHIGREH 463

Query: 168 KSNHVMYVIDFKRTVYYQKCYDPDCK 91
           KSNHVMY++DF+R  YYQKCYDPDC+
Sbjct: 464 KSNHVMYIVDFQRAAYYQKCYDPDCR 489


>ref|XP_002513641.1| conserved hypothetical protein [Ricinus communis]
           gi|223547549|gb|EEF49044.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 601

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/106 (67%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
 Frame = -1

Query: 342 TYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGLIVYNMLRNRYCERIGRQHKS 163
           T   GKSPFP+LD FVESIA++G++SG+IRSWYWFSEY L+VY+M RNRYCERIGRQHKS
Sbjct: 402 TCTTGKSPFPSLDKFVESIATVGSLSGKIRSWYWFSEYELMVYSMSRNRYCERIGRQHKS 461

Query: 162 NHVMYVIDFKRTVYYQKCYDPDCKG-STTAKPV-LICILVPSFILA 31
           NHV+YV+D +R VYYQKC+DPDC+G  +  +PV L  I  PSF  A
Sbjct: 462 NHVIYVVDLRRAVYYQKCHDPDCQGYRSPLRPVPLYLIPDPSFSYA 507