BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029301
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kD...   201   3e-54
ref|XP_004139127.1| PREDICTED: signal recognition particle 68 kD...   201   3e-54
ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ...   193   1e-52
ref|XP_002864762.1| hypothetical protein ARALYDRAFT_496370 [Arab...   192   4e-52
ref|NP_568947.1| signal recognition particle subunit SRP68 [Arab...   192   4e-52

>ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cucumis
           sativus]
          Length = 594

 Score =  201 bits (510), Expect(2) = 3e-54
 Identities = 105/152 (69%), Positives = 115/152 (75%)
 Frame = +3

Query: 48  VKWATLFAQLCGAKGDSRTALEAEAYASYMKGSLLFELDENWDTTLDNFKSARAVYEELG 227
           VKWATLFAQLC +KGDSRT+LEAEAYASYM G+LLFE D NWDT L NFK ARAVYEELG
Sbjct: 126 VKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDTALLNFKRARAVYEELG 185

Query: 228 KDGDMENQVLCREQVEELEPSIRYCLHKVGEPNLQTSLHKVGETNVQTSLHEVGEPNVQT 407
           K GD+ENQVLCRE+VEELEPSIRYCLHK+G+ NLQ S                       
Sbjct: 186 KVGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQAS----------------------- 222

Query: 408 AELSDIGKMEGPAVDLFEAKLEAVMDEARSQQ 503
            EL  IG+MEGPA+DLF+AKLEAVM EARSQQ
Sbjct: 223 -ELLHIGEMEGPALDLFKAKLEAVMSEARSQQ 253



 Score = 36.2 bits (82), Expect(2) = 3e-54
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 1   HAMEKRQLPDGPNARQ 48
           HAMEKRQLPDGPN RQ
Sbjct: 99  HAMEKRQLPDGPNPRQ 114


>ref|XP_004139127.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cucumis
           sativus]
          Length = 574

 Score =  201 bits (510), Expect(2) = 3e-54
 Identities = 105/152 (69%), Positives = 115/152 (75%)
 Frame = +3

Query: 48  VKWATLFAQLCGAKGDSRTALEAEAYASYMKGSLLFELDENWDTTLDNFKSARAVYEELG 227
           VKWATLFAQLC +KGDSRT+LEAEAYASYM G+LLFE D NWDT L NFK ARAVYEELG
Sbjct: 107 VKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDTALLNFKRARAVYEELG 166

Query: 228 KDGDMENQVLCREQVEELEPSIRYCLHKVGEPNLQTSLHKVGETNVQTSLHEVGEPNVQT 407
           K GD+ENQVLCRE+VEELEPSIRYCLHK+G+ NLQ S                       
Sbjct: 167 KVGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQAS----------------------- 203

Query: 408 AELSDIGKMEGPAVDLFEAKLEAVMDEARSQQ 503
            EL  IG+MEGPA+DLF+AKLEAVM EARSQQ
Sbjct: 204 -ELLHIGEMEGPALDLFKAKLEAVMSEARSQQ 234



 Score = 36.2 bits (82), Expect(2) = 3e-54
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 1   HAMEKRQLPDGPNARQ 48
           HAMEKRQLPDGPN RQ
Sbjct: 80  HAMEKRQLPDGPNPRQ 95


>ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
           communis] gi|223550210|gb|EEF51697.1| Signal recognition
           particle 68 kDa protein, putative [Ricinus communis]
          Length = 594

 Score =  193 bits (491), Expect(2) = 1e-52
 Identities = 100/152 (65%), Positives = 113/152 (74%)
 Frame = +3

Query: 48  VKWATLFAQLCGAKGDSRTALEAEAYASYMKGSLLFELDENWDTTLDNFKSARAVYEELG 227
           V+WA LF+QLC AKGDSRT+LEAEAYA+YM G+LLFE D NWDT L NF SARAVYEELG
Sbjct: 125 VQWANLFSQLCAAKGDSRTSLEAEAYAAYMNGNLLFEQDRNWDTALKNFISARAVYEELG 184

Query: 228 KDGDMENQVLCREQVEELEPSIRYCLHKVGEPNLQTSLHKVGETNVQTSLHEVGEPNVQT 407
           K GD+ENQVLCRE+VEELEPSIRYC HK+G+ NLQTS                       
Sbjct: 185 KYGDLENQVLCRERVEELEPSIRYCRHKIGQSNLQTS----------------------- 221

Query: 408 AELSDIGKMEGPAVDLFEAKLEAVMDEARSQQ 503
            +L  IG+MEGPA+DLF+ KLEAVM EARSQQ
Sbjct: 222 -DLLQIGEMEGPALDLFKTKLEAVMAEARSQQ 252



 Score = 38.1 bits (87), Expect(2) = 1e-52
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 1   HAMEKRQLPDGPNARQ 48
           HAMEKRQLPDGPNARQ
Sbjct: 98  HAMEKRQLPDGPNARQ 113


>ref|XP_002864762.1| hypothetical protein ARALYDRAFT_496370 [Arabidopsis lyrata subsp.
           lyrata] gi|297310597|gb|EFH41021.1| hypothetical protein
           ARALYDRAFT_496370 [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  192 bits (487), Expect(2) = 4e-52
 Identities = 99/152 (65%), Positives = 115/152 (75%)
 Frame = +3

Query: 48  VKWATLFAQLCGAKGDSRTALEAEAYASYMKGSLLFELDENWDTTLDNFKSARAVYEELG 227
           VKWA+LF+ LC  K DSRT+LEAEAYASYMKG+LLFE D+NW+T L  FK+ARAVYEELG
Sbjct: 133 VKWASLFSSLCSIKTDSRTSLEAEAYASYMKGTLLFEQDQNWETGLACFKNARAVYEELG 192

Query: 228 KDGDMENQVLCREQVEELEPSIRYCLHKVGEPNLQTSLHKVGETNVQTSLHEVGEPNVQT 407
           K GD+ENQVLCRE+VEELEPSIRYCLHK+G+ NLQTS                       
Sbjct: 193 KYGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQTS----------------------- 229

Query: 408 AELSDIGKMEGPAVDLFEAKLEAVMDEARSQQ 503
            EL  IG+MEGPA+DLF+AK+EA M+EARSQQ
Sbjct: 230 -ELLQIGEMEGPALDLFKAKIEAAMEEARSQQ 260



 Score = 38.1 bits (87), Expect(2) = 4e-52
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 1   HAMEKRQLPDGPNARQ 48
           HAMEKRQLPDGPNARQ
Sbjct: 106 HAMEKRQLPDGPNARQ 121


>ref|NP_568947.1| signal recognition particle subunit SRP68 [Arabidopsis thaliana]
           gi|9758397|dbj|BAB08884.1| signal recognition particle
           68kD protein-like [Arabidopsis thaliana]
           gi|15293137|gb|AAK93679.1| putative signal recognition
           particle protein [Arabidopsis thaliana]
           gi|19310613|gb|AAL85037.1| putative signal recognition
           particle protein [Arabidopsis thaliana]
           gi|332010161|gb|AED97544.1| signal recognition particle
           subunit SRP68 [Arabidopsis thaliana]
          Length = 605

 Score =  192 bits (487), Expect(2) = 4e-52
 Identities = 99/152 (65%), Positives = 115/152 (75%)
 Frame = +3

Query: 48  VKWATLFAQLCGAKGDSRTALEAEAYASYMKGSLLFELDENWDTTLDNFKSARAVYEELG 227
           VKWA+LF+ LC  K DSRT+LEAEAYASYMKG+LLFE D+NW+T L  FK+ARAVYEELG
Sbjct: 133 VKWASLFSSLCSIKTDSRTSLEAEAYASYMKGTLLFEQDQNWETGLACFKNARAVYEELG 192

Query: 228 KDGDMENQVLCREQVEELEPSIRYCLHKVGEPNLQTSLHKVGETNVQTSLHEVGEPNVQT 407
           K GD+ENQVLCRE+VEELEPSIRYCLHK+G+ NLQTS                       
Sbjct: 193 KYGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQTS----------------------- 229

Query: 408 AELSDIGKMEGPAVDLFEAKLEAVMDEARSQQ 503
            EL  IG+MEGPA+DLF+AK+EA M+EARSQQ
Sbjct: 230 -ELLQIGEMEGPALDLFKAKIEAAMEEARSQQ 260



 Score = 38.1 bits (87), Expect(2) = 4e-52
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 1   HAMEKRQLPDGPNARQ 48
           HAMEKRQLPDGPNARQ
Sbjct: 106 HAMEKRQLPDGPNARQ 121