BLASTX nr result

ID: Coptis21_contig00029281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029281
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523034.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002265038.1| PREDICTED: uncharacterized protein LOC100245...   124   1e-26
ref|XP_003568285.1| PREDICTED: uncharacterized protein LOC100835...   122   2e-26
ref|NP_191084.1| uncharacterized protein [Arabidopsis thaliana] ...   122   2e-26
ref|XP_002533662.1| conserved hypothetical protein [Ricinus comm...   122   3e-26

>ref|XP_002523034.1| conserved hypothetical protein [Ricinus communis]
           gi|223537717|gb|EEF39338.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/96 (69%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +3

Query: 15  MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWIELEKENKEFF 194
           MGDSS ASYI +VQHLIEKCL+F+MT+EECMEALSKHANITPVITSTVW ELEKENKEFF
Sbjct: 1   MGDSS-ASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITSTVWNELEKENKEFF 59

Query: 195 EGYYWRKREEHKV-EMEPKDMIQKMLTAESSTEDSQ 299
           E Y   KR++ ++ E E   MIQKM++  S   D Q
Sbjct: 60  EAYIESKRKDDRMSEEETSQMIQKMISESSKDSDDQ 95


>ref|XP_002265038.1| PREDICTED: uncharacterized protein LOC100245098 [Vitis vinifera]
           gi|302143639|emb|CBI22392.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 5/99 (5%)
 Frame = +3

Query: 15  MGDSS--SASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWIELEKENKE 188
           MGDSS  SASYI +VQHLIEKCL+F+MT+E+CMEALSKHA+I PVITSTVW ELEKENKE
Sbjct: 1   MGDSSASSASYIHMVQHLIEKCLIFHMTKEQCMEALSKHADIQPVITSTVWNELEKENKE 60

Query: 189 FFEGYYWRKR---EEHKVEMEPKDMIQKMLTAESSTEDS 296
           FFE YY + R   ++   E E  +MIQKM+T  S   D+
Sbjct: 61  FFEVYYTQTRTRDDDQMSETETTEMIQKMITKSSKHSDT 99


>ref|XP_003568285.1| PREDICTED: uncharacterized protein LOC100835403 [Brachypodium
           distachyon]
          Length = 99

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
 Frame = +3

Query: 15  MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWIELEKENKEFF 194
           MGDSSSASYIR+V HLIEKC+ FN+ +EEC+EAL KHA+I PV+TSTVW ELEKEN+EFF
Sbjct: 1   MGDSSSASYIRMVHHLIEKCICFNLNKEECIEALEKHASINPVVTSTVWKELEKENREFF 60

Query: 195 EGYYWRKREEHKVEMEPKDMIQKMLT--AESSTEDSQD 302
           E Y  + R E K+E E    +QKML+  A S T D  D
Sbjct: 61  ETYQ-KDRAERKIEAETMQRVQKMLSDAAASRTSDDDD 97


>ref|NP_191084.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297820286|ref|XP_002878026.1| hypothetical protein
           ARALYDRAFT_485945 [Arabidopsis lyrata subsp. lyrata]
           gi|7019657|emb|CAB75758.1| putative protein [Arabidopsis
           thaliana] gi|19310583|gb|AAL85022.1| unknown protein
           [Arabidopsis thaliana] gi|24030411|gb|AAN41364.1|
           unknown protein [Arabidopsis thaliana]
           gi|297323864|gb|EFH54285.1| hypothetical protein
           ARALYDRAFT_485945 [Arabidopsis lyrata subsp. lyrata]
           gi|332645835|gb|AEE79356.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 95

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/94 (64%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = +3

Query: 15  MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWIELEKENKEFF 194
           M DSSSASYI +VQH+IEKCL+F+M++EEC+EALSKHANITPVITSTVW ELEKENKEFF
Sbjct: 1   MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 195 EGYYWRK-REEHKVEMEPKDMIQKMLTAESSTED 293
           + Y  R+ ++E   E E   MIQK+++  S   D
Sbjct: 61  KAYEERQSKQEQMSEEETNQMIQKIISDSSKESD 94


>ref|XP_002533662.1| conserved hypothetical protein [Ricinus communis]
           gi|223526444|gb|EEF28721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = +3

Query: 15  MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWIELEKENKEFF 194
           MGDSS ASYIR+VQHLIE+CL+F MT+EECMEALSKHANITPVITSTVW ELEKENKEFF
Sbjct: 1   MGDSS-ASYIRMVQHLIERCLIFRMTKEECMEALSKHANITPVITSTVWNELEKENKEFF 59

Query: 195 EGYYWRKREEHKV-EMEPKDMIQKMLTAESSTEDSQ 299
           E Y   K ++ ++ + E   MIQKM+   S   D Q
Sbjct: 60  EVYAQSKSKDDRMSDEETTQMIQKMVLEPSRDPDDQ 95


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