BLASTX nr result

ID: Coptis21_contig00029277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029277
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532549.1| PREDICTED: uncharacterized protein LOC100802...    59   3e-07
ref|XP_002276420.2| PREDICTED: uncharacterized protein LOC100255...    55   8e-06
emb|CBI27188.3| unnamed protein product [Vitis vinifera]               55   8e-06
emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera]    55   8e-06
ref|XP_002527686.1| ATP binding protein, putative [Ricinus commu...    54   1e-05

>ref|XP_003532549.1| PREDICTED: uncharacterized protein LOC100802148 [Glycine max]
          Length = 1060

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 240 NNVDVILDFLRRNRFARAEAALLGELSNRPDLS 338
           N+VDVILDFLRRNRF RAEAALL E+SNRPDL+
Sbjct: 9   NSVDVILDFLRRNRFTRAEAALLSEISNRPDLN 41


>ref|XP_002276420.2| PREDICTED: uncharacterized protein LOC100255903 [Vitis vinifera]
          Length = 1142

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 228 AMAQNNVDVILDFLRRNRFARAEAALLGELSNRPDLS 338
           A   ++VDVILDFLRRNRF RAEAAL  EL NRPDL+
Sbjct: 2   AADSSSVDVILDFLRRNRFTRAEAALRSELGNRPDLN 38


>emb|CBI27188.3| unnamed protein product [Vitis vinifera]
          Length = 1855

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 228 AMAQNNVDVILDFLRRNRFARAEAALLGELSNRPDLS 338
           A   ++VDVILDFLRRNRF RAEAAL  EL NRPDL+
Sbjct: 784 AADSSSVDVILDFLRRNRFTRAEAALRSELGNRPDLN 820


>emb|CAN68568.1| hypothetical protein VITISV_029434 [Vitis vinifera]
          Length = 1697

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 228 AMAQNNVDVILDFLRRNRFARAEAALLGELSNRPDLS 338
           A   ++VDVILDFLRRNRF RAEAAL  EL NRPDL+
Sbjct: 863 AADSSSVDVILDFLRRNRFTRAEAALRSELGNRPDLN 899


>ref|XP_002527686.1| ATP binding protein, putative [Ricinus communis]
           gi|223532917|gb|EEF34685.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1102

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 243 NVDVILDFLRRNRFARAEAALLGELSNRPDLS 338
           +VDVILDFL+RNRF RAEAAL  ELSNRPDL+
Sbjct: 6   SVDVILDFLKRNRFTRAEAALRSELSNRPDLN 37


Top