BLASTX nr result

ID: Coptis21_contig00029276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029276
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635126.1| PREDICTED: formyltetrahydrofolate deformylas...   521   e-145
ref|XP_002304283.1| formyltetrahydrofolate deformylase [Populus ...   504   e-140
ref|XP_004147219.1| PREDICTED: formyltetrahydrofolate deformylas...   497   e-138
ref|NP_001240181.1| uncharacterized protein LOC100780134 [Glycin...   489   e-136
ref|XP_003549921.1| PREDICTED: formyltetrahydrofolate deformylas...   488   e-136

>ref|XP_003635126.1| PREDICTED: formyltetrahydrofolate deformylase-like [Vitis vinifera]
           gi|297744389|emb|CBI37363.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score =  521 bits (1342), Expect = e-145
 Identities = 254/329 (77%), Positives = 286/329 (86%), Gaps = 1/329 (0%)
 Frame = -1

Query: 999 MTLFQKVSSRFPRIVGLPISPFDSSKFFNKSLYSSFSSTPNT-AHGIHVFQCPDGVGIVA 823
           M+L +++S+  P+++G     F S KF  +SL+   SS+ ++ AHGIHVF CPDGVGIVA
Sbjct: 1   MSLRRRLSTSLPQLLGFTNRSFKSLKFPQQSLHCFNSSSESSLAHGIHVFHCPDGVGIVA 60

Query: 822 KLSECISSRGGNILSVDVFVPENKNVFYSRSEFVFDPNRWPRPEMDADFLKLSKLFNAMK 643
           KLS+CI+SRGGNIL  D+FVPENK VFYSRSEF+FDP +WPR +MD DFLKLS +FNAMK
Sbjct: 61  KLSDCIASRGGNILGADIFVPENKKVFYSRSEFIFDPAKWPRAQMDEDFLKLSNMFNAMK 120

Query: 642 SVVRVPAFDHKYKIAILASKQDHCLVDLLHGWQSGRFPVDITHVISNHDRGPNTHVIRFL 463
           SVVRVP  D KYKI++LASKQDHCLVDLLHGWQ GR PVDIT VISNHDRGPNTHV RFL
Sbjct: 121 SVVRVPILDPKYKISVLASKQDHCLVDLLHGWQDGRLPVDITCVISNHDRGPNTHVFRFL 180

Query: 462 ERHGIPYHYLGTKKGTERESEVLELVRNTDFLVLARYMQVVSGDFLDSYGKDVINIHHGL 283
           ERHGIPYHYL T K  +RE E+L+LV++TDFLVLARYMQ++SG+FL SYGKD+INIHHGL
Sbjct: 181 ERHGIPYHYLHTTKENKREGEILDLVQDTDFLVLARYMQILSGNFLKSYGKDIINIHHGL 240

Query: 282 LPSFKGGYPSKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSEN 103
           LPSFKGG PSKQAFDAGVKLIGATSHFVTEELDAGPII QMVERV HRDNL+SFVQKSEN
Sbjct: 241 LPSFKGGNPSKQAFDAGVKLIGATSHFVTEELDAGPIIGQMVERVCHRDNLKSFVQKSEN 300

Query: 102 LEKQCLANAIKSYCELRVLPYEDNKTVVF 16
           LEKQCL  AIKSYCELRVLPYEDNKTVVF
Sbjct: 301 LEKQCLVKAIKSYCELRVLPYEDNKTVVF 329


>ref|XP_002304283.1| formyltetrahydrofolate deformylase [Populus trichocarpa]
           gi|222841715|gb|EEE79262.1| formyltetrahydrofolate
           deformylase [Populus trichocarpa]
          Length = 317

 Score =  504 bits (1298), Expect = e-140
 Identities = 244/324 (75%), Positives = 279/324 (86%)
 Frame = -1

Query: 987 QKVSSRFPRIVGLPISPFDSSKFFNKSLYSSFSSTPNTAHGIHVFQCPDGVGIVAKLSEC 808
           ++VSSR P++ G           F +S  SS   +  T HGIHVFQCPD VGIVAKLSEC
Sbjct: 6   RRVSSRIPQVFG-----------FGRSFKSSLDPSSIT-HGIHVFQCPDAVGIVAKLSEC 53

Query: 807 ISSRGGNILSVDVFVPENKNVFYSRSEFVFDPNRWPRPEMDADFLKLSKLFNAMKSVVRV 628
           I+SRGGNIL  D+FVP+NKNVFYSRSEF+FDP +WPR +MD DFL++SK+F+A +SVVRV
Sbjct: 54  IASRGGNILGADIFVPQNKNVFYSRSEFIFDPVKWPRVQMDEDFLRISKMFDATRSVVRV 113

Query: 627 PAFDHKYKIAILASKQDHCLVDLLHGWQSGRFPVDITHVISNHDRGPNTHVIRFLERHGI 448
           P  D K+KIA++ASKQ+HCL+DLLH WQ GR PVDIT VISNHDRGP+THVIRFLER+GI
Sbjct: 114 PKLDPKFKIAVIASKQEHCLIDLLHSWQDGRLPVDITRVISNHDRGPDTHVIRFLERNGI 173

Query: 447 PYHYLGTKKGTERESEVLELVRNTDFLVLARYMQVVSGDFLDSYGKDVINIHHGLLPSFK 268
           PYHYL T K  +RE E+L+LV+NTDFLVLARYMQ++SG FL SYGKD+INIHHGLLPSFK
Sbjct: 174 PYHYLHTTKENKREEEILDLVQNTDFLVLARYMQILSGKFLQSYGKDIINIHHGLLPSFK 233

Query: 267 GGYPSKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQC 88
           GG PSKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDN+QSFV+KSENLEKQC
Sbjct: 234 GGNPSKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNIQSFVRKSENLEKQC 293

Query: 87  LANAIKSYCELRVLPYEDNKTVVF 16
           +A AIKSYCELRVLPYE+NKTVVF
Sbjct: 294 IAKAIKSYCELRVLPYEENKTVVF 317


>ref|XP_004147219.1| PREDICTED: formyltetrahydrofolate deformylase-like [Cucumis
           sativus] gi|449504944|ref|XP_004162337.1| PREDICTED:
           formyltetrahydrofolate deformylase-like [Cucumis
           sativus]
          Length = 326

 Score =  497 bits (1280), Expect = e-138
 Identities = 248/328 (75%), Positives = 275/328 (83%)
 Frame = -1

Query: 999 MTLFQKVSSRFPRIVGLPISPFDSSKFFNKSLYSSFSSTPNTAHGIHVFQCPDGVGIVAK 820
           M L ++VSS FPR+ G       S     ++L    SS+   AHGIHVF CPD VGIVAK
Sbjct: 1   MALIRRVSSSFPRVFGFANRSLSSLNSPGEALDLPTSSS--FAHGIHVFHCPDAVGIVAK 58

Query: 819 LSECISSRGGNILSVDVFVPENKNVFYSRSEFVFDPNRWPRPEMDADFLKLSKLFNAMKS 640
           LSECI+S+GGNIL+ D+FVPENKNVFYSRS+F+FDP +WPR +MD DFLK+SK FNA KS
Sbjct: 59  LSECIASKGGNILNADIFVPENKNVFYSRSQFLFDPCKWPRMQMDEDFLKISKTFNAWKS 118

Query: 639 VVRVPAFDHKYKIAILASKQDHCLVDLLHGWQSGRFPVDITHVISNHDRGPNTHVIRFLE 460
           VVRVP  D KYKIAI ASKQDHCLVDLLH WQ G+ PV+IT VISNHDR PNTHV+RFLE
Sbjct: 119 VVRVPDQDPKYKIAIFASKQDHCLVDLLHQWQGGKLPVEITCVISNHDRAPNTHVMRFLE 178

Query: 459 RHGIPYHYLGTKKGTERESEVLELVRNTDFLVLARYMQVVSGDFLDSYGKDVINIHHGLL 280
           RH I YHYL T    +RE E+LELV+NTDFLVLARYMQV+SG+FL SYG DVINIHHGLL
Sbjct: 179 RHDIAYHYLHTYNDNKREGEILELVKNTDFLVLARYMQVLSGNFLRSYGNDVINIHHGLL 238

Query: 279 PSFKGGYPSKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENL 100
           PSFKG  PSKQAF+AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENL
Sbjct: 239 PSFKGSNPSKQAFNAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENL 298

Query: 99  EKQCLANAIKSYCELRVLPYEDNKTVVF 16
           EKQCL NAI+SYCELRVLPYE+N+TVVF
Sbjct: 299 EKQCLTNAIRSYCELRVLPYEENRTVVF 326


>ref|NP_001240181.1| uncharacterized protein LOC100780134 [Glycine max]
           gi|255636588|gb|ACU18632.1| unknown [Glycine max]
          Length = 316

 Score =  489 bits (1259), Expect = e-136
 Identities = 235/296 (79%), Positives = 262/296 (88%)
 Frame = -1

Query: 903 YSSFSSTPNTAHGIHVFQCPDGVGIVAKLSECISSRGGNILSVDVFVPENKNVFYSRSEF 724
           + S     +  HGIHVF CPD VGIVAKLS+CI+SRGGNIL+ DVFVPENK+VFYSRS+F
Sbjct: 21  FKSLDPPSSLTHGIHVFHCPDAVGIVAKLSDCIASRGGNILAADVFVPENKHVFYSRSDF 80

Query: 723 VFDPNRWPRPEMDADFLKLSKLFNAMKSVVRVPAFDHKYKIAILASKQDHCLVDLLHGWQ 544
           VFDP +WPR +M+ DFLKLS+ F A++SVVRVPA D KYKIA+LASKQDHCLVDLLHGWQ
Sbjct: 81  VFDPVKWPRVQMEEDFLKLSQTFKAIRSVVRVPALDPKYKIAVLASKQDHCLVDLLHGWQ 140

Query: 543 SGRFPVDITHVISNHDRGPNTHVIRFLERHGIPYHYLGTKKGTERESEVLELVRNTDFLV 364
            GR PVDIT VISNH RG NTHVIRFLERHGIPYHYL T K  +RE E+L+LV+NTD LV
Sbjct: 141 DGRLPVDITCVISNHHRGSNTHVIRFLERHGIPYHYLCTTKENKREGEILQLVQNTDILV 200

Query: 363 LARYMQVVSGDFLDSYGKDVINIHHGLLPSFKGGYPSKQAFDAGVKLIGATSHFVTEELD 184
           LARYMQ++SG+FL SYG D+INIHHGLLPSFKGG PSKQAF+AGVKLIGATSHFVTEELD
Sbjct: 201 LARYMQILSGNFLRSYGNDIINIHHGLLPSFKGGNPSKQAFEAGVKLIGATSHFVTEELD 260

Query: 183 AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLANAIKSYCELRVLPYEDNKTVVF 16
           AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCL+ AI+SYCELRVLPYE+ +TVVF
Sbjct: 261 AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLSKAIRSYCELRVLPYEEKRTVVF 316


>ref|XP_003549921.1| PREDICTED: formyltetrahydrofolate deformylase-like [Glycine max]
          Length = 316

 Score =  488 bits (1257), Expect = e-136
 Identities = 234/296 (79%), Positives = 262/296 (88%)
 Frame = -1

Query: 903 YSSFSSTPNTAHGIHVFQCPDGVGIVAKLSECISSRGGNILSVDVFVPENKNVFYSRSEF 724
           + S     +  HGIHVF CPD VGIVAKLS+CI+SRGGNIL+ DVFVPENK VFYSRS+F
Sbjct: 21  FKSLDPPSSLTHGIHVFHCPDAVGIVAKLSDCIASRGGNILAADVFVPENKQVFYSRSDF 80

Query: 723 VFDPNRWPRPEMDADFLKLSKLFNAMKSVVRVPAFDHKYKIAILASKQDHCLVDLLHGWQ 544
           VFDP +WPR +M+ DFLKLS+ FNA++SVVRVPA D KYKIA+LASKQDHCLVDLLHGWQ
Sbjct: 81  VFDPVKWPRVQMEEDFLKLSQTFNAIRSVVRVPALDPKYKIAVLASKQDHCLVDLLHGWQ 140

Query: 543 SGRFPVDITHVISNHDRGPNTHVIRFLERHGIPYHYLGTKKGTERESEVLELVRNTDFLV 364
            GR PVDIT VISNH RG NTHVIRFLERHGIPYH L T K  +RE E+L+L++NTDFLV
Sbjct: 141 DGRLPVDITCVISNHHRGSNTHVIRFLERHGIPYHCLCTTKENKREGEILQLIQNTDFLV 200

Query: 363 LARYMQVVSGDFLDSYGKDVINIHHGLLPSFKGGYPSKQAFDAGVKLIGATSHFVTEELD 184
           LARYMQ++SG+FL SYG D+INIHHGLLPSFKGG PSKQAF+AGVKLIGATSH+VTEELD
Sbjct: 201 LARYMQILSGNFLRSYGNDIINIHHGLLPSFKGGNPSKQAFEAGVKLIGATSHYVTEELD 260

Query: 183 AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLANAIKSYCELRVLPYEDNKTVVF 16
           AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCL+ AI+SYCELRVLPYE+ +TVVF
Sbjct: 261 AGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLSKAIRSYCELRVLPYEEKRTVVF 316


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